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GENE CARD

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Gene Card

Best human hits

HOXA4; HOXB4; HOXC4

Species

M.occidentalis

Unique Gene ID

Moocci.g00029801

Gene Model ID

Moocci.CG.ELv1_2.S647652.g29801

Location

S647652:17194..19293

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S647652.g29801.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
Homeobox_dom ProSiteProfiles Homeobox domain
Homeobox_dom CDD Homeobox domain
Homeobox-like_sf SUPERFAMILY Homeobox-like domain superfamily
Homeobox_CS ProSitePatterns Homeobox, conserved site
Homeobox_dom Pfam Homeobox domain
Homeobox_metazoa PRINTS Homeobox domain, metazoa
Homeobox_dom SMART Homeobox domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

35 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function
skeletal system development Hs biological process
morphogenesis of an epithelial sheet Hs biological process
DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
centrosome Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
transcription from RNA polymerase II promoter Hs biological process
multicellular organism development Hs biological process
cell proliferation Hs biological process
anatomical structure morphogenesis Hs biological process
anterior/posterior pattern specification Hs biological process
nuclear body Hs cellular component
hemopoiesis Hs biological process
sequence-specific DNA binding Hs molecular function
positive regulation of transcription from RNA polymerase II promoter Hs biological process
somatic stem cell division Hs biological process
embryonic organ morphogenesis Hs biological process
skeletal system morphogenesis Hs biological process
cartilage development Hs biological process
definitive hemopoiesis Hs biological process
hematopoietic stem cell differentiation Hs biological process
HMG box domain binding Hs molecular function
positive regulation of stem cell differentiation Hs biological process
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function
nucleoplasm Hs cellular component
cell junction Hs cellular component

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function 136 1.09e-37
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 136 1.09e-37
transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function 136 1.09e-37
DNA binding Hs molecular function 136 1.09e-37
transcription factor activity, sequence-specific DNA binding Hs molecular function 136 1.09e-37
protein binding Hs molecular function 136 1.09e-37
nucleus Hs cellular component 136 1.09e-37
centrosome Hs cellular component 135 2.61e-37
nuclear body Hs cellular component 136 3.72e-37
sequence-specific DNA binding Hs molecular function 136 1.09e-37
HMG box domain binding Hs molecular function 136 1.09e-37

GO (InterProScan)

3 results

GO Term Analysis Type e-value
DNA binding SMART molecular function 8.5E-28
regulation of transcription, DNA-templated ProSitePatterns biological process
sequence-specific DNA binding ProSitePatterns molecular function

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