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GENE CARD

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  1. Gene 'Boschl.CG.Botznik201...'
  2. Gene 'Moocci.CG.ELv1_2.S64...'

Gene Card

Best human hits

DAW1; PRPF4; WDR12

Species

M.occidentalis

Unique Gene ID

Moocci.g00029463

Gene Model ID

Moocci.CG.ELv1_2.S645416.g29463

Location

S645416:8504..9788

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S645416.g29463.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
NLE Pfam NLE
WD40_repeat Pfam WD40 repeat
WD40_repeat ProSiteProfiles WD40 repeat
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
G-protein_beta_WD-40_rep PRINTS G-protein beta WD-40 repeat
WD40_repeat_CS ProSitePatterns WD40 repeat, conserved site
WDR12/Ytm1 Hamap WD repeat WDR12/Ytm1
WD40_repeat SMART WD40 repeat

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Hs biological process
maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Hs biological process
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
nucleolus Hs cellular component
rRNA processing Hs biological process
Notch signaling pathway Hs biological process
cell proliferation Hs biological process
preribosome, large subunit precursor Hs cellular component
ribosome biogenesis Hs biological process
ribosomal large subunit biogenesis Hs biological process
ribonucleoprotein complex binding Hs molecular function
PeBoW complex Hs cellular component

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein binding Hs molecular function 386 6.12e-132
nucleus Hs cellular component 386 6.12e-132
nucleoplasm Hs cellular component 386 6.12e-132
spliceosomal complex Hs cellular component 90.9 1.29e-19
nucleolus Hs cellular component 386 6.12e-132
cytoplasm Hs cellular component 90.5 1.12e-19
cilium Hs cellular component 90.5 1.12e-19
Cajal body Hs cellular component 90.9 1.29e-19
nuclear speck Hs cellular component 90.9 1.29e-19
U6 snRNA binding Hs molecular function 90.9 1.29e-19
U4 snRNA binding Hs molecular function 90.9 1.29e-19
preribosome, large subunit precursor Hs cellular component 386 6.12e-132
cell projection Hs cellular component 90.5 1.12e-19
ribonucleoprotein complex binding Hs molecular function 386 6.12e-132
U4/U6 x U5 tri-snRNP complex Hs cellular component 90.9 1.29e-19
PeBoW complex Hs cellular component 386 6.12e-132
U4/U6 snRNP Hs cellular component 90.9 1.29e-19
spliceosomal snRNP complex Hs cellular component 90.9 1.29e-19

GO (InterProScan)

2 results

GO Term Analysis Type e-value
protein binding Gene3D molecular function 3.0E-74
ribosome biogenesis Hamap biological process 29.869