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GENE CARD

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Gene Card

Best human hits

COP1; TAF5L; WDR5B

Species

M.occidentalis

Unique Gene ID

Moocci.g00025185

Gene Model ID

Moocci.CG.ELv1_2.S607047.g25185

Location

S607047:2140..4117

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S607047.g25185.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term Analysis Definition
WD40_repeat ProSiteProfiles WD40 repeat
Znf_RING_CS ProSitePatterns Zinc finger, RING-type, conserved site
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
Znf_RING ProSiteProfiles Zinc finger, RING-type
WD40_repeat_CS ProSitePatterns WD40 repeat, conserved site
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Znf_RING SMART Zinc finger, RING-type
WD40_repeat Pfam WD40 repeat
G-protein_beta_WD-40_rep PRINTS G-protein beta WD-40 repeat
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain
WD40_repeat SMART WD40 repeat

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
Golgi membrane Hs cellular component
ubiquitin-protein transferase activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
response to ionizing radiation Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
protein ubiquitination Hs biological process
nuclear speck Hs cellular component
transferase activity Hs molecular function
Cul4A-RING E3 ubiquitin ligase complex Hs cellular component
positive regulation of proteasomal ubiquitin-dependent protein catabolic process Hs biological process
proteasome-mediated ubiquitin-dependent protein catabolic process Hs biological process
post-translational protein modification Hs biological process
metal ion binding Hs molecular function
ubiquitin protein ligase activity Hs molecular function

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 691 0.0
transcription factor activity, sequence-specific DNA binding Hs molecular function 76.6 1.70e-14
transcription coactivator activity Hs molecular function 76.6 1.70e-14
histone acetyltransferase activity Hs molecular function 76.6 1.70e-14
ubiquitin-protein transferase activity Hs molecular function 691 0.0
protein binding Hs molecular function 691 0.0
nucleus Hs cellular component 691 0.0
nucleoplasm Hs cellular component 691 0.0
cytoplasm Hs cellular component 691 0.0
cytosol Hs cellular component 691 0.0
membrane Hs cellular component 691 0.0
integral component of membrane Hs cellular component 691 0.0
nuclear speck Hs cellular component 691 0.0
transferase activity Hs molecular function 691 0.0
STAGA complex Hs cellular component 76.6 1.70e-14
Cul4A-RING E3 ubiquitin ligase complex Hs cellular component 691 0.0
transcription factor TFTC complex Hs cellular component 76.6 1.70e-14
ciliary basal body Hs cellular component 76.6 5.34e-15
cytoplasmic ribonucleoprotein granule Hs cellular component 76.6 1.70e-14
metal ion binding Hs molecular function 691 0.0
ubiquitin protein ligase activity Hs molecular function 691 0.0

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Gene3D molecular function 9.5E-125