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GENE CARD

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  1. Gene 'Moocci.CG.ELv1_2.S60...'

Gene Card

Best human hits

PABPC1; PABPC1L; PABPC4

Species

M.occidentalis

Unique Gene ID

Moocci.g00024806

Gene Model ID

Moocci.CG.ELv1_2.S602699.g24806

Location

S602699:5929..7006

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S602699.g24806.01.t

External Database Gene Card

External database links

No result

Collections
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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
RRM_dom Pfam RNA recognition motif domain
RRM_dom ProSiteProfiles RNA recognition motif domain
RRM_dom SMART RNA recognition motif domain
Nucleotide-bd_a/b_plait_sf Gene3D Nucleotide-binding alpha-beta plait domain superfamily
RBD_domain_sf SUPERFAMILY RNA-binding domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 148 1.25e-39
RNA binding Hs molecular function 148 1.25e-39
mRNA binding Hs molecular function 148 1.25e-39
mRNA 3'-UTR binding Hs molecular function 134 6.91e-35
protein binding Hs molecular function 148 1.25e-39
nucleus Hs cellular component 148 1.25e-39
spliceosomal complex Hs cellular component 134 6.91e-35
cytoplasm Hs cellular component 148 1.25e-39
cytosol Hs cellular component 148 1.25e-39
focal adhesion Hs cellular component 134 6.91e-35
protein C-terminus binding Hs molecular function 134 6.91e-35
poly(A) binding Hs molecular function 148 1.25e-39
poly(U) RNA binding Hs molecular function 148 1.25e-39
translation activator activity Hs molecular function 134 6.91e-35
cytoplasmic stress granule Hs cellular component 148 1.25e-39
membrane Hs cellular component 134 6.91e-35
intracellular ribonucleoprotein complex Hs cellular component 148 1.25e-39
cytoplasmic ribonucleoprotein granule Hs cellular component 134 6.91e-35
extracellular exosome Hs cellular component 138 4.09e-36
catalytic step 2 spliceosome Hs cellular component 134 6.91e-35

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SUPERFAMILY molecular function 4.43E-27