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GENE CARD

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Gene Card

Best human hits

LRWD1; NEDD1; TAF5

Species

M.occidentalis

Unique Gene ID

Moocci.g00024233

Gene Model ID

Moocci.CG.ELv1_2.S594792.g24233

Location

S594792:5219..13051

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S594792.g24233.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
WD40_repeat ProSiteProfiles WD40 repeat
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
WD40_repeat_CS ProSitePatterns WD40 repeat, conserved site
WD40_repeat SMART WD40 repeat
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
WD40_repeat Pfam WD40 repeat

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
chromosome, centromeric region Hs cellular component
kinetochore Hs cellular component
condensed chromosome kinetochore Hs cellular component
chromosome, telomeric region Hs cellular component
chromatin binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nuclear origin of replication recognition complex Hs cellular component
chromosome Hs cellular component
pericentric heterochromatin Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
microtubule organizing center Hs cellular component
cytoskeleton Hs cellular component
DNA replication Hs biological process
DNA replication initiation Hs biological process
chromatin organization Hs biological process
methyl-CpG binding Hs molecular function
telomeric heterochromatin Hs cellular component
methylated histone binding Hs molecular function
intracellular membrane-bounded organelle Hs cellular component
establishment of protein localization to chromatin Hs biological process

GO (Blast)

35 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
pericentriolar material Hs cellular component 44.3 5.65e-05
chromosome, centromeric region Hs cellular component 144 4.49e-39
kinetochore Hs cellular component 144 4.49e-39
condensed chromosome kinetochore Hs cellular component 144 4.49e-39
chromosome, telomeric region Hs cellular component 144 4.49e-39
nuclear chromatin Hs cellular component 43.1 1.38e-04
spindle pole Hs cellular component 44.3 5.65e-05
chromatin binding Hs molecular function 144 4.49e-39
transcription factor activity, sequence-specific DNA binding Hs molecular function 43.1 1.38e-04
histone acetyltransferase activity Hs molecular function 43.1 1.38e-04
protein binding Hs molecular function 144 4.49e-39
nucleus Hs cellular component 144 4.49e-39
nucleoplasm Hs cellular component 43.1 1.38e-04
nuclear origin of replication recognition complex Hs cellular component 144 4.49e-39
transcription factor TFIID complex Hs cellular component 43.1 1.38e-04
chromosome Hs cellular component 144 4.49e-39
pericentric heterochromatin Hs cellular component 144 4.49e-39
nucleolus Hs cellular component 144 4.49e-39
cytoplasm Hs cellular component 144 4.49e-39
centrosome Hs cellular component 44.3 5.65e-05
centriole Hs cellular component 44.3 5.65e-05
microtubule organizing center Hs cellular component 144 4.49e-39
cytosol Hs cellular component 44.3 5.65e-05
cytoskeleton Hs cellular component 144 4.49e-39
methyl-CpG binding Hs molecular function 144 4.49e-39
actin cytoskeleton Hs cellular component 43.1 1.38e-04
telomeric heterochromatin Hs cellular component 144 4.49e-39
transcription factor TFTC complex Hs cellular component 43.1 1.38e-04
methylated histone binding Hs molecular function 144 4.49e-39
ciliary basal body Hs cellular component 44.3 5.65e-05
identical protein binding Hs molecular function 43.1 1.38e-04
intracellular membrane-bounded organelle Hs cellular component 144 4.49e-39
transcription regulatory region DNA binding Hs molecular function 43.1 1.38e-04
apical part of cell Hs cellular component 44.3 5.65e-05
protein dimerization activity Hs molecular function 43.1 1.38e-04

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Gene3D molecular function 4.0E-31