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GENE CARD

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Gene Card

Best human hits

RNF139; RNF145; SYVN1

Species

M.occidentalis

Unique Gene ID

Moocci.g00021990

Gene Model ID

Moocci.CG.ELv1_2.S562449.g21990

Location

S562449:486..6766

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S562449.g21990.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Znf_RING Pfam Zinc finger, RING-type
Znf_RING ProSiteProfiles Zinc finger, RING-type
Znf_RING SMART Zinc finger, RING-type
TRC8_N_dom Pfam TRC8 N-terminal domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein polyubiquitination Hs biological process
zinc ion binding Hs molecular function
membrane Hs cellular component
integral component of membrane Hs cellular component
proteasome-mediated ubiquitin-dependent protein catabolic process Hs biological process
metal ion binding Hs molecular function
ubiquitin protein ligase activity Hs molecular function

GO (Blast)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Hrd1p ubiquitin ligase complex Hs cellular component 57.4 1.08e-08
Hrd1p ubiquitin ligase ERAD-L complex Hs cellular component 57.4 1.08e-08
protease binding Hs molecular function 105 5.84e-24
ubiquitin-protein transferase activity Hs molecular function 105 5.84e-24
receptor activity Hs molecular function 105 5.84e-24
protein binding Hs molecular function 105 5.84e-24
nucleoplasm Hs cellular component 57.4 1.08e-08
endoplasmic reticulum Hs cellular component 105 5.84e-24
endoplasmic reticulum membrane Hs cellular component 105 5.84e-24
smooth endoplasmic reticulum Hs cellular component 57.4 1.08e-08
zinc ion binding Hs molecular function 145 3.72e-37
membrane Hs cellular component 145 3.72e-37
integral component of membrane Hs cellular component 145 3.72e-37
transferase activity Hs molecular function 105 5.84e-24
ligase activity Hs molecular function 105 5.84e-24
ubiquitin-like protein transferase activity Hs molecular function 105 5.84e-24
integral component of endoplasmic reticulum membrane Hs cellular component 57.4 1.08e-08
Derlin-1 retrotranslocation complex Hs cellular component 105 5.84e-24
endoplasmic reticulum quality control compartment Hs cellular component 105 5.84e-24
metal ion binding Hs molecular function 145 3.72e-37
unfolded protein binding Hs molecular function 57.4 1.08e-08
chaperone binding Hs molecular function 57.4 1.08e-08
ATPase binding Hs molecular function 57.4 1.08e-08
ubiquitin protein ligase activity Hs molecular function 145 3.72e-37
ubiquitin protein ligase activity involved in ERAD pathway Hs molecular function 105 5.84e-24
ubiquitin-specific protease binding Hs molecular function 57.4 1.08e-08

GO (InterProScan)

No result

GO Term Analysis Type e-value