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GENE CARD

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  1. Gene 'Moocci.CG.ELv1_2.S53...'

Gene Card

Best human hits

AP4B1; COPG1; COPG2

Species

M.occidentalis

Unique Gene ID

Moocci.g00020384

Gene Model ID

Moocci.CG.ELv1_2.S533608.g20384

Location

S533608:48968..51584

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S533608.g20384.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
TBP_dom_sf Gene3D TBP domain superfamily
ARM-like Gene3D Armadillo-like helical
Clathrin/coatomer_adapt-like_N Pfam Clathrin/coatomer adaptor, adaptin-like, N-terminal
Coatomer_gsu PANTHER Coatomer gamma subunit
Coatomer_gsu_app_Ig-like_dom Pfam Coatomer, gamma subunit, appendage, Ig-like subdomain
Clathrin_app_Ig-like_sf SUPERFAMILY Clathrin adaptor, appendage, Ig-like subdomain superfamily
Coatomer_g_Cpla Pfam Coatomer subunit gamma, C-terminal
Coatomer_gsu_app_sf Gene3D Coatomer, gamma subunit, appendage domain superfamily
Coatomer_gsu PIRSF Coatomer gamma subunit
ARM-type_fold SUPERFAMILY Armadillo-type fold
Coatomer/calthrin_app_sub_C SUPERFAMILY Coatomer/calthrin adaptor appendage, C-terminal subdomain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
Golgi membrane Hs cellular component
structural molecule activity Hs molecular function
binding Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
endoplasmic reticulum membrane Hs cellular component
Golgi apparatus Hs cellular component
cytosol Hs cellular component
intracellular protein transport Hs biological process
ER to Golgi vesicle-mediated transport Hs biological process
retrograde vesicle-mediated transport, Golgi to ER Hs biological process
intra-Golgi vesicle-mediated transport Hs biological process
protein transport Hs biological process
membrane Hs cellular component
vesicle-mediated transport Hs biological process
membrane coat Hs cellular component
COPI vesicle coat Hs cellular component
transport vesicle Hs cellular component
COPI-coated vesicle membrane Hs cellular component
cytoplasmic vesicle Hs cellular component
establishment of Golgi localization Hs biological process
organelle transport along microtubule Hs biological process

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 1295 0.0
structural molecule activity Hs molecular function 1295 0.0
binding Hs molecular function 1295 0.0
protein binding Hs molecular function 1276 0.0
cytoplasm Hs cellular component 1295 0.0
endoplasmic reticulum membrane Hs cellular component 1295 0.0
Golgi apparatus Hs cellular component 1295 0.0
trans-Golgi network Hs cellular component 50.4 3.89e-06
cytosol Hs cellular component 1295 0.0
membrane Hs cellular component 1295 0.0
extrinsic component of membrane Hs cellular component 50.4 3.89e-06
membrane coat Hs cellular component 1295 0.0
AP-4 adaptor complex Hs cellular component 50.4 3.89e-06
COPI vesicle coat Hs cellular component 1295 0.0
clathrin adaptor complex Hs cellular component 50.4 3.89e-06
transport vesicle Hs cellular component 1295 0.0
clathrin binding Hs molecular function 50.4 3.89e-06
COPI-coated vesicle membrane Hs cellular component 1295 0.0
cytoplasmic vesicle Hs cellular component 1295 0.0
endosome lumen Hs cellular component 50.4 3.89e-06
trans-Golgi network membrane Hs cellular component 50.4 3.89e-06

GO (InterProScan)

6 results

GO Term Analysis Type e-value
structural molecule activity Gene3D molecular function 7.0E-65
binding SUPERFAMILY molecular function 1.73E-92
intracellular protein transport Pfam biological process 7.7E-128
vesicle-mediated transport Pfam biological process 7.7E-128
membrane coat Pfam cellular component 7.7E-128
COPI vesicle coat Gene3D cellular component 7.0E-65