Login
Help

GENE CARD

Submit your Data

  1. Gene 'Moocci.CG.ELv1_2.S64...'

Gene Card

Best human hits

TNC; TNN; TNR

Species

M.occidentalis

Unique Gene ID

Moocci.g00018048

Gene Model ID

Moocci.CG.ELv1_2.S490408.g18048

Location

S490408:4905..5849

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S490408.g18048.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Fibrinogen_a/b/g_C_dom SMART Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen_a/b/g_C_dom Pfam Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen-like_C SUPERFAMILY Fibrinogen-like, C-terminal
Fibrinogen_a/b/g_C_dom ProSiteProfiles Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen_CS ProSitePatterns Fibrinogen, conserved site

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
integrin binding Hs molecular function 89.4 6.13e-22
protein binding Hs molecular function 96.7 1.68e-24
extracellular region Hs cellular component 96.7 1.68e-24
proteinaceous extracellular matrix Hs cellular component 96.7 1.68e-24
basement membrane Hs cellular component 96.7 1.68e-24
interstitial matrix Hs cellular component 96.7 1.68e-24
extracellular space Hs cellular component 96.7 1.68e-24
endoplasmic reticulum lumen Hs cellular component 96.7 1.68e-24
focal adhesion Hs cellular component 96.7 1.68e-24
cell surface Hs cellular component 91.3 1.12e-22
membrane Hs cellular component 96.7 1.68e-24
extracellular matrix Hs cellular component 96.7 1.68e-24
identical protein binding Hs molecular function 89.4 6.13e-22
neuron projection Hs cellular component 89.4 6.13e-22
neuronal cell body Hs cellular component 89.4 6.13e-22
membrane raft Hs cellular component 91.3 1.12e-22
syndecan binding Hs molecular function 96.7 1.68e-24
perineuronal net Hs cellular component 91.3 1.12e-22
CA3 pyramidal cell dendrite Hs cellular component 89.4 6.13e-22
hippocampal mossy fiber expansion Hs cellular component 89.4 6.13e-22

GO (InterProScan)

No result

GO Term Analysis Type e-value