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GENE CARD

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Gene Card

Best human hits

TSEN2

Species

M.occidentalis

Unique Gene ID

Moocci.g00016012

Gene Model ID

Moocci.CG.ELv1_2.S470798.g16012

Location

S470798:4841..5931

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S470798.g16012.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
tRNA_endonuc-like_dom_sf Gene3D tRNA endonuclease-like domain superfamily
tRNA_splic PANTHER tRNA-splicing endonuclease
tRNA_intron_Endonuc_cat-like Pfam tRNA intron endonuclease, catalytic domain-like
tRNA_intron_Endonuc_N Pfam tRNA intron endonuclease, N-terminal
tRNA_intron_Endo_cat-like_sf SUPERFAMILY tRNA intron endonuclease, catalytic domain-like superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
tRNA-intron endonuclease activity Hs molecular function
tRNA-intron endonuclease complex Hs cellular component
tRNA-type intron splice site recognition and cleavage Hs biological process
nucleic acid binding Hs molecular function
nuclease activity Hs molecular function
endonuclease activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
nucleolus Hs cellular component
centrosome Hs cellular component
cytosol Hs cellular component
tRNA splicing, via endonucleolytic cleavage and ligation Hs biological process
mRNA processing Hs biological process
tRNA processing Hs biological process
lyase activity Hs molecular function
nucleic acid phosphodiester bond hydrolysis Hs biological process
RNA phosphodiester bond hydrolysis Hs biological process
RNA phosphodiester bond hydrolysis, endonucleolytic Hs biological process

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
tRNA-intron endonuclease activity Hs molecular function 145 9.12e-42
tRNA-intron endonuclease complex Hs cellular component 145 9.12e-42
nucleic acid binding Hs molecular function 145 9.12e-42
nuclease activity Hs molecular function 145 9.12e-42
endonuclease activity Hs molecular function 145 9.12e-42
protein binding Hs molecular function 145 9.12e-42
nucleus Hs cellular component 145 9.12e-42
nucleoplasm Hs cellular component 145 9.12e-42
nucleolus Hs cellular component 145 9.12e-42
centrosome Hs cellular component 145 9.12e-42
cytosol Hs cellular component 145 9.12e-42
lyase activity Hs molecular function 145 9.12e-42

GO (InterProScan)

4 results

GO Term Analysis Type e-value
tRNA-intron endonuclease activity PANTHER molecular function 2.0E-57
nucleic acid binding Gene3D molecular function 1.1E-24
nuclease activity Gene3D molecular function 1.1E-24
tRNA splicing, via endonucleolytic cleavage and ligation PANTHER biological process 2.0E-57