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GENE CARD

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  1. Pub 'PMID:16381930'

Gene Card

Best human hits

GATA4; GATA5; GATA6

Species

M.occidentalis

Unique Gene ID

Moocci.g00015101

Gene Model ID

Moocci.CG.ELv1_2.S458966.g15101

Location

S458966:11986..19937

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S458966.g15101.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Znf_GATA ProSiteProfiles Zinc finger, GATA-type
Znf_GATA SMART Zinc finger, GATA-type
Znf_NHR/GATA Gene3D Zinc finger, NHR/GATA-type
Znf_GATA Pfam Zinc finger, GATA-type
Znf_GATA ProSitePatterns Zinc finger, GATA-type
Znf_GATA PRINTS Zinc finger, GATA-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

29 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 148 9.64e-39
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 142 6.82e-36
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 148 9.64e-39
transcription factor activity, RNA polymerase II transcription factor binding Hs molecular function 148 9.64e-39
RNA polymerase II transcription factor binding Hs molecular function 148 9.64e-39
RNA polymerase II repressing transcription factor binding Hs molecular function 142 6.82e-36
enhancer sequence-specific DNA binding Hs molecular function 148 9.64e-39
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 148 9.64e-39
DNA binding Hs molecular function 148 9.64e-39
chromatin binding Hs molecular function 148 9.64e-39
transcription factor activity, sequence-specific DNA binding Hs molecular function 148 9.64e-39
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function 142 6.82e-36
transcription coactivator activity Hs molecular function 148 9.64e-39
protein binding Hs molecular function 148 9.64e-39
nucleus Hs cellular component 148 9.64e-39
nucleoplasm Hs cellular component 148 9.64e-39
transcription factor complex Hs cellular component 142 6.82e-36
transcription factor binding Hs molecular function 148 9.64e-39
zinc ion binding Hs molecular function 148 9.64e-39
nuclear body Hs cellular component 148 9.64e-39
protein kinase binding Hs molecular function 148 9.64e-39
nuclear membrane Hs cellular component 142 6.82e-36
activating transcription factor binding Hs molecular function 148 9.64e-39
sequence-specific DNA binding Hs molecular function 148 9.64e-39
transcription regulatory region DNA binding Hs molecular function 148 9.64e-39
metal ion binding Hs molecular function 148 9.64e-39
NFAT protein binding Hs molecular function 148 9.64e-39
co-SMAD binding Hs molecular function 148 9.64e-39
RNA polymerase II transcription factor complex Hs cellular component 148 9.64e-39

GO (InterProScan)

4 results

GO Term Analysis Type e-value
transcription factor activity, sequence-specific DNA binding SMART molecular function 2.1E-21
regulation of transcription, DNA-templated Gene3D biological process 2.3E-26
zinc ion binding Gene3D molecular function 2.3E-26
sequence-specific DNA binding SMART molecular function 2.1E-21