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GENE CARD

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Gene Card

Best human hits

RARA; RARB; RARG

Species

M.occidentalis

Unique Gene ID

Moocci.g00013630

Gene Model ID

Moocci.CG.ELv1_2.S436781.g13630

Location

S436781:32017..41747

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S436781.g13630.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Nuc_orph_rcpt PRINTS Orphan nuclear receptor
Nucl_hrmn_rcpt_lig-bd Pfam Nuclear hormone receptor, ligand-binding domain
NHR_like_dom_sf SUPERFAMILY Nuclear hormone receptor-like domain superfamily
Nuclear_hrmn_rcpt PRINTS Nuclear hormone receptor
Nucl_hrmn_rcpt_lig-bd SMART Nuclear hormone receptor, ligand-binding domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

106 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
nuclear chromatin Hs cellular component
translation repressor activity, nucleic acid binding Hs molecular function
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
RNA polymerase II regulatory region DNA binding Hs molecular function
ureteric bud development Hs biological process
neural tube closure Hs biological process
liver development Hs biological process
retinoic acid binding Hs molecular function
chondrocyte development Hs biological process
retinal pigment epithelium development Hs biological process
DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
steroid hormone receptor activity Hs molecular function
retinoic acid receptor activity Hs molecular function
transcription coactivator activity Hs molecular function
transcription corepressor activity Hs molecular function
nuclear receptor activity Hs molecular function
receptor binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
transcription factor complex Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
transcription initiation from RNA polymerase II promoter Hs biological process
protein phosphorylation Hs biological process
signal transduction Hs biological process
germ cell development Hs biological process
spermatogenesis Hs biological process
transcription factor binding Hs molecular function
drug binding Hs molecular function
zinc ion binding Hs molecular function
positive regulation of cell proliferation Hs biological process
negative regulation of cell proliferation Hs biological process
regulation of cell size Hs biological process
male gonad development Hs biological process
anterior/posterior pattern specification Hs biological process
cell surface Hs cellular component
regulation of gene expression Hs biological process
positive regulation of gene expression Hs biological process
negative regulation of gene expression Hs biological process
actin cytoskeleton Hs cellular component
integral component of membrane Hs cellular component
negative regulation of translation Hs biological process
enzyme binding Hs molecular function
protein domain specific binding Hs molecular function
neurogenesis Hs biological process
dendrite Hs cellular component
embryonic camera-type eye development Hs biological process
chromatin DNA binding Hs molecular function
regulation of myelination Hs biological process
response to estradiol Hs biological process
response to retinoic acid Hs biological process
response to cytokine Hs biological process
embryonic hindlimb morphogenesis Hs biological process
multicellular organism growth Hs biological process
histone deacetylase binding Hs molecular function
regulation of apoptotic process Hs biological process
neuron projection Hs cellular component
camera-type eye development Hs biological process
neuronal cell body Hs cellular component
positive regulation of apoptotic process Hs biological process
negative regulation of apoptotic process Hs biological process
positive regulation of programmed cell death Hs biological process
apoptotic cell clearance Hs biological process
steroid hormone mediated signaling pathway Hs biological process
protein kinase B binding Hs molecular function
sequence-specific DNA binding Hs molecular function
transcription regulatory region DNA binding Hs molecular function
retinoic acid-responsive element binding Hs molecular function
response to ethanol Hs biological process
negative regulation of cell differentiation Hs biological process
regulation of myeloid cell differentiation Hs biological process
positive regulation of neuron differentiation Hs biological process
positive regulation of cell cycle Hs biological process
negative regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
negative regulation of translational initiation Hs biological process
metal ion binding Hs molecular function
retinoid X receptor binding Hs molecular function
protein heterodimerization activity Hs molecular function
mRNA 5'-UTR binding Hs molecular function
embryonic eye morphogenesis Hs biological process
regulation of synaptic plasticity Hs biological process
retinoic acid receptor signaling pathway Hs biological process
perinuclear region of cytoplasm Hs cellular component
embryonic digestive tract development Hs biological process
reproductive structure development Hs biological process
protein kinase A binding Hs molecular function
alpha-actinin binding Hs molecular function
ventricular cardiac muscle cell differentiation Hs biological process
retina development in camera-type eye Hs biological process
canonical Wnt signaling pathway Hs biological process
limb development Hs biological process
face development Hs biological process
bone development Hs biological process
bone morphogenesis Hs biological process
epithelium development Hs biological process
cellular response to lipopolysaccharide Hs biological process
cellular response to retinoic acid Hs biological process
cellular response to estrogen stimulus Hs biological process

GO (Blast)

44 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nuclear chromatin Hs cellular component 203 2.16e-61
translation repressor activity, nucleic acid binding Hs molecular function 203 2.16e-61
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 203 2.16e-61
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 203 2.16e-61
RNA polymerase II regulatory region DNA binding Hs molecular function 203 2.16e-61
retinoic acid binding Hs molecular function 203 2.16e-61
DNA binding Hs molecular function 203 2.16e-61
transcription factor activity, sequence-specific DNA binding Hs molecular function 203 2.16e-61
steroid hormone receptor activity Hs molecular function 203 2.16e-61
retinoic acid receptor activity Hs molecular function 203 2.16e-61
transcription coactivator activity Hs molecular function 203 2.16e-61
transcription corepressor activity Hs molecular function 203 2.16e-61
nuclear receptor activity Hs molecular function 203 2.16e-61
receptor binding Hs molecular function 203 2.16e-61
protein binding Hs molecular function 203 2.16e-61
nucleus Hs cellular component 203 2.16e-61
nucleoplasm Hs cellular component 203 2.16e-61
transcription factor complex Hs cellular component 177 7.29e-52
cytoplasm Hs cellular component 203 2.16e-61
cytosol Hs cellular component 203 2.16e-61
transcription factor binding Hs molecular function 203 2.16e-61
drug binding Hs molecular function 203 2.16e-61
zinc ion binding Hs molecular function 203 2.16e-61
cell surface Hs cellular component 203 2.16e-61
actin cytoskeleton Hs cellular component 203 2.16e-61
integral component of membrane Hs cellular component 177 7.29e-52
enzyme binding Hs molecular function 203 2.16e-61
protein domain specific binding Hs molecular function 203 2.16e-61
dendrite Hs cellular component 203 2.16e-61
chromatin DNA binding Hs molecular function 203 2.16e-61
histone deacetylase binding Hs molecular function 203 2.16e-61
neuron projection Hs cellular component 203 2.16e-61
neuronal cell body Hs cellular component 203 2.16e-61
protein kinase B binding Hs molecular function 203 2.16e-61
sequence-specific DNA binding Hs molecular function 203 2.16e-61
transcription regulatory region DNA binding Hs molecular function 203 2.16e-61
retinoic acid-responsive element binding Hs molecular function 203 2.16e-61
metal ion binding Hs molecular function 203 2.16e-61
retinoid X receptor binding Hs molecular function 201 6.37e-61
protein heterodimerization activity Hs molecular function 203 2.16e-61
mRNA 5'-UTR binding Hs molecular function 203 2.16e-61
perinuclear region of cytoplasm Hs cellular component 203 2.16e-61
protein kinase A binding Hs molecular function 203 2.16e-61
alpha-actinin binding Hs molecular function 203 2.16e-61

GO (InterProScan)

6 results

GO Term Analysis Type e-value
DNA binding PRINTS molecular function 3.8E-7
steroid hormone receptor activity PRINTS molecular function 3.8E-7
nuclear receptor activity PRINTS molecular function 1.6E-5
nucleus PRINTS cellular component 3.8E-7
regulation of transcription, DNA-templated SMART biological process 1.5E-9
steroid hormone mediated signaling pathway SMART biological process 1.5E-9