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GENE CARD

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Gene Card

Best human hits

HMCN1; HMCN2; HSPG2

Species

M.occidentalis

Unique Gene ID

Moocci.g00012026

Gene Model ID

Moocci.CG.ELv1_2.S406144.g12026

Location

S406144:2617..28298

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S406144.g12026.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

29 results

IPR Term Analysis Definition
LDrepeatLR_classA_rpt SMART Low-density lipoprotein (LDL) receptor class A repeat
ConA-like_dom_sf SUPERFAMILY Concanavalin A-like lectin/glucanase domain superfamily
Ig-like_dom ProSiteProfiles Immunoglobulin-like domain
Ig_sub SMART Immunoglobulin subtype
EGF-like_CS ProSitePatterns EGF-like, conserved site
Laminin_EGF Pfam Laminin EGF domain
Growth_fac_rcpt_cys_sf SUPERFAMILY Growth factor receptor cysteine-rich domain superfamily
Ig-like_dom_sf SUPERFAMILY Immunoglobulin-like domain superfamily
Laminin_G ProSiteProfiles Laminin G domain
Laminin_EGF ProSiteProfiles Laminin EGF domain
Ig-like_fold Gene3D Immunoglobulin-like fold
LDrepeatLR_classA_rpt CDD Low-density lipoprotein (LDL) receptor class A repeat
LDL_receptor-like_sf SUPERFAMILY LDL receptor-like superfamily
EGF-like_dom SMART EGF-like domain
Laminin_G Pfam Laminin G domain
Laminin_EGF ProSitePatterns Laminin EGF domain
LDrepeatLR_classA_rpt Pfam Low-density lipoprotein (LDL) receptor class A repeat
EGF-like_dom ProSiteProfiles EGF-like domain
LDLR_class-A_CS ProSitePatterns Low-density lipoprotein (LDL) receptor class A, conserved site
Laminin_IV SMART Laminin IV
Ig_V-set SMART Immunoglobulin V-set domain
Laminin_IV ProSiteProfiles Laminin IV
Ig_I-set Pfam Immunoglobulin I-set
LDrepeatLR_classA_rpt ProSiteProfiles Low-density lipoprotein (LDL) receptor class A repeat
Ig_sub2 SMART Immunoglobulin subtype 2
Laminin_EGF SMART Laminin EGF domain
Laminin_IV Pfam Laminin IV
Laminin_G SMART Laminin G domain
LDrepeatLR_classA_rpt PRINTS Low-density lipoprotein (LDL) receptor class A repeat

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

30 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
retinoid metabolic process Hs biological process
angiogenesis Hs biological process
calcium ion binding Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
proteinaceous extracellular matrix Hs cellular component
basement membrane Hs cellular component
extracellular space Hs cellular component
Golgi lumen Hs cellular component
plasma membrane Hs cellular component
focal adhesion Hs cellular component
glycosaminoglycan biosynthetic process Hs biological process
glycosaminoglycan catabolic process Hs biological process
lipid metabolic process Hs biological process
receptor-mediated endocytosis Hs biological process
inflammatory response Hs biological process
brain development Hs biological process
protein C-terminus binding Hs molecular function
cell growth Hs biological process
negative regulation of angiogenesis Hs biological process
cell differentiation Hs biological process
extracellular matrix organization Hs biological process
glycosaminoglycan metabolic process Hs biological process
extracellular matrix Hs cellular component
lysosomal lumen Hs cellular component
metal ion binding Hs molecular function
low-density lipoprotein particle receptor binding Hs molecular function
extracellular exosome Hs cellular component
cardiovascular system development Hs biological process
plasma membrane protein complex Hs cellular component

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
calcium ion binding Hs molecular function 1275 0.0
protein binding Hs molecular function 1275 0.0
extracellular region Hs cellular component 1275 0.0
proteinaceous extracellular matrix Hs cellular component 1275 0.0
basement membrane Hs cellular component 1275 0.0
extracellular space Hs cellular component 1275 0.0
cytoplasm Hs cellular component 302 2.11e-81
Golgi lumen Hs cellular component 1275 0.0
plasma membrane Hs cellular component 1275 0.0
focal adhesion Hs cellular component 1275 0.0
cell cortex Hs cellular component 361 2.56e-99
protein C-terminus binding Hs molecular function 1275 0.0
membrane Hs cellular component 361 2.56e-99
cell junction Hs cellular component 361 2.56e-99
extracellular matrix Hs cellular component 1275 0.0
cleavage furrow Hs cellular component 361 2.56e-99
lysosomal lumen Hs cellular component 1275 0.0
metal ion binding Hs molecular function 1275 0.0
low-density lipoprotein particle receptor binding Hs molecular function 1275 0.0
extracellular exosome Hs cellular component 1275 0.0
plasma membrane protein complex Hs cellular component 1275 0.0

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding PRINTS molecular function 9.2E-18