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GENE CARD

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  1. Gene 'Moocci.CG.ELv1_2.S36...'

Gene Card

Best human hits

SRSF12; SRSF2; SRSF8

Species

M.occidentalis

Unique Gene ID

Moocci.g00010352

Gene Model ID

Moocci.CG.ELv1_2.S369049.g10352

Location

S369049:1530..2304

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S369049.g10352.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
RRM_dom Pfam RNA recognition motif domain
RRM_dom SMART RNA recognition motif domain
RRM_dom_euk SMART RNA recognition motif domain, eukaryote
RRM_dom ProSiteProfiles RNA recognition motif domain
RBD_domain_sf SUPERFAMILY RNA-binding domain superfamily
Nucleotide-bd_a/b_plait_sf Gene3D Nucleotide-binding alpha-beta plait domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
mitotic cell cycle Hs biological process
regulation of alternative mRNA splicing, via spliceosome Hs biological process
mRNA splicing, via spliceosome Hs biological process
nucleic acid binding Hs molecular function
transcription corepressor activity Hs molecular function
RNA binding Hs molecular function
protein kinase C binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
spliceosomal complex Hs cellular component
cytosol Hs cellular component
termination of RNA polymerase II transcription Hs biological process
mRNA processing Hs biological process
RNA export from nucleus Hs biological process
mRNA export from nucleus Hs biological process
RNA splicing Hs biological process
nuclear speck Hs cellular component
mRNA 3'-end processing Hs biological process
interchromatin granule Hs cellular component
pre-mRNA binding Hs molecular function
regulation of RNA splicing Hs biological process
extracellular exosome Hs cellular component
negative regulation of nucleic acid-templated transcription Hs biological process

GO (Blast)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 151 7.47e-48
transcription corepressor activity Hs molecular function 151 7.47e-48
RNA binding Hs molecular function 151 7.47e-48
protein kinase C binding Hs molecular function 151 7.47e-48
protein binding Hs molecular function 151 7.47e-48
nucleus Hs cellular component 151 7.47e-48
nucleoplasm Hs cellular component 151 7.47e-48
spliceosomal complex Hs cellular component 151 7.47e-48
cytosol Hs cellular component 151 7.47e-48
nuclear speck Hs cellular component 151 7.47e-48
interchromatin granule Hs cellular component 151 7.47e-48
pre-mRNA binding Hs molecular function 151 7.47e-48
RS domain binding Hs molecular function 76.6 1.87e-18
unfolded protein binding Hs molecular function 76.6 1.87e-18
extracellular exosome Hs cellular component 151 7.47e-48

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SUPERFAMILY molecular function 2.96E-28