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GENE CARD

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Gene Card

Best human hits

GNPTG; PRKCSH; SORL1

Species

M.occidentalis

Unique Gene ID

Moocci.g00005312

Gene Model ID

Moocci.CG.ELv1_2.S236365.g05312

Location

S236365:31794..36544

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S236365.g05312.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
LDrepeatLR_classA_rpt CDD Low-density lipoprotein (LDL) receptor class A repeat
Man6P_isomerase_rcpt-bd_dom_sf Gene3D Mannose-6-phosphate receptor binding domain superfamily
PRKCSH_N Pfam Glucosidase II beta subunit, N-terminal
PRKCSH Pfam Glucosidase 2 subunit beta-like
Glucosidase_2_bsu PANTHER Glucosidase 2 subunit beta

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
liver development Hs biological process
RNA binding Hs molecular function
protein kinase C binding Hs molecular function
calcium ion binding Hs molecular function
protein binding Hs molecular function
intracellular Hs cellular component
endoplasmic reticulum Hs cellular component
endoplasmic reticulum lumen Hs cellular component
protein folding Hs biological process
N-glycan processing Hs biological process
nitrogen compound metabolic process Hs biological process
negative regulation of neuron projection development Hs biological process
intracellular signal transduction Hs biological process
post-translational protein modification Hs biological process
ion channel binding Hs molecular function
metal ion binding Hs molecular function
phosphoprotein binding Hs molecular function
protein heterooligomerization Hs biological process
renal system development Hs biological process

GO (Blast)

34 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 62.8 9.69e-11
amyloid-beta binding Hs molecular function 42.4 8.39e-04
RNA binding Hs molecular function 253 2.13e-77
UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity Hs molecular function 62.8 9.69e-11
transmembrane signaling receptor activity Hs molecular function 42.4 8.39e-04
low-density lipoprotein receptor activity Hs molecular function 42.4 8.39e-04
protein kinase C binding Hs molecular function 253 2.13e-77
calcium ion binding Hs molecular function 253 2.13e-77
protein binding Hs molecular function 253 2.13e-77
extracellular region Hs cellular component 62.8 9.69e-11
extracellular space Hs cellular component 42.4 8.39e-04
intracellular Hs cellular component 253 2.13e-77
nuclear envelope lumen Hs cellular component 42.4 8.39e-04
endosome Hs cellular component 42.4 8.39e-04
early endosome Hs cellular component 42.4 8.39e-04
endoplasmic reticulum Hs cellular component 253 2.13e-77
endoplasmic reticulum lumen Hs cellular component 253 2.13e-77
Golgi apparatus Hs cellular component 62.8 9.69e-11
trans-Golgi network Hs cellular component 42.4 8.39e-04
integral component of plasma membrane Hs cellular component 42.4 8.39e-04
endosome membrane Hs cellular component 42.4 8.39e-04
membrane Hs cellular component 62.8 9.69e-11
integral component of membrane Hs cellular component 42.4 8.39e-04
low-density lipoprotein particle binding Hs molecular function 42.4 8.39e-04
ADP-ribosylation factor binding Hs molecular function 42.4 8.39e-04
Golgi cisterna Hs cellular component 42.4 8.39e-04
low-density lipoprotein particle Hs cellular component 42.4 8.39e-04
protein homodimerization activity Hs molecular function 62.8 9.69e-11
intracellular membrane-bounded organelle Hs cellular component 62.8 9.69e-11
ion channel binding Hs molecular function 253 2.13e-77
metal ion binding Hs molecular function 253 2.13e-77
phosphoprotein binding Hs molecular function 253 2.13e-77
recycling endosome Hs cellular component 42.4 8.39e-04
extracellular exosome Hs cellular component 62.8 9.69e-11

GO (InterProScan)

2 results

GO Term Analysis Type e-value
protein binding CDD molecular function 0.00143942
N-glycan processing PANTHER biological process 1.9E-129