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Gene Card

Best human hits

DNA2; IGHMBP2; UPF1

Species

M.occidentalis

Unique Gene ID

Moocci.g00005175

Gene Model ID

Moocci.CG.ELv1_2.S231516.g05175

Location

S231516:26114..31256

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S231516.g05175.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

13 results

IPR Term Analysis Definition
Helicase_ATP-bd SMART Helicase superfamily 1/2, ATP-binding domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Znf_AN1 ProSiteProfiles Zinc finger, AN1-type
SMUBP-2/Hcs1-like TIGRFAM Helicase SMUBP-2/Hcs1-like
R3H_dom SMART R3H domain
R3H_dom ProSiteProfiles R3H domain
AN1-like_Znf SUPERFAMILY AN1-like Zinc finger
Znf_AN1 Pfam Zinc finger, AN1-type
R3H_dom_sf SUPERFAMILY R3H domain superfamily
AN1-like_Znf Gene3D AN1-like Zinc finger
R3H_dom_sf Gene3D R3H domain superfamily
R3H_dom Pfam R3H domain
AAA+_ATPase SMART AAA+ ATPase domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

34 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
tRNA binding Hs molecular function
nucleotide binding Hs molecular function
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
DNA helicase activity Hs molecular function
single-stranded DNA binding Hs molecular function
RNA binding Hs molecular function
helicase activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
DNA replication Hs biological process
DNA repair Hs biological process
DNA recombination Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
translation Hs biological process
DNA-dependent ATPase activity Hs molecular function
transcription factor binding Hs molecular function
RNA-dependent ATPase activity Hs molecular function
zinc ion binding Hs molecular function
membrane Hs cellular component
hydrolase activity Hs molecular function
axon Hs cellular component
growth cone Hs cellular component
intracellular ribonucleoprotein complex Hs cellular component
DNA duplex unwinding Hs biological process
ATP-dependent 5'-3' RNA helicase activity Hs molecular function
cell projection Hs cellular component
ribosome binding Hs molecular function
ATP-dependent 5'-3' DNA helicase activity Hs molecular function
metal ion binding Hs molecular function
protein homooligomerization Hs biological process

GO (Blast)

49 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
tRNA binding Hs molecular function 648 0.0
nucleotide binding Hs molecular function 648 0.0
nuclear chromosome, telomeric region Hs cellular component 218 2.20e-58
chromatin Hs cellular component 218 2.20e-58
P-body Hs cellular component 218 2.20e-58
nucleic acid binding Hs molecular function 648 0.0
DNA binding Hs molecular function 648 0.0
DNA helicase activity Hs molecular function 648 0.0
chromatin binding Hs molecular function 218 2.20e-58
single-stranded DNA binding Hs molecular function 648 0.0
RNA binding Hs molecular function 648 0.0
catalytic activity Hs molecular function 181 1.20e-46
ATP-dependent RNA helicase activity Hs molecular function 218 2.20e-58
helicase activity Hs molecular function 648 0.0
nuclease activity Hs molecular function 181 1.20e-46
endonuclease activity Hs molecular function 181 1.20e-46
protein binding Hs molecular function 648 0.0
ATP binding Hs molecular function 648 0.0
nucleus Hs cellular component 648 0.0
nucleoplasm Hs cellular component 218 2.20e-58
cytoplasm Hs cellular component 648 0.0
mitochondrion Hs cellular component 181 1.20e-46
gamma DNA polymerase complex Hs cellular component 181 1.20e-46
cytosol Hs cellular component 218 2.20e-58
DNA-dependent ATPase activity Hs molecular function 648 0.0
transcription factor binding Hs molecular function 648 0.0
RNA-dependent ATPase activity Hs molecular function 648 0.0
zinc ion binding Hs molecular function 648 0.0
membrane Hs cellular component 648 0.0
hydrolase activity Hs molecular function 648 0.0
ATPase activity Hs molecular function 181 1.20e-46
site-specific endodeoxyribonuclease activity, specific for altered base Hs molecular function 181 1.20e-46
5'-flap endonuclease activity Hs molecular function 181 1.20e-46
axon Hs cellular component 648 0.0
growth cone Hs cellular component 648 0.0
intracellular ribonucleoprotein complex Hs cellular component 648 0.0
ATP-dependent 5'-3' RNA helicase activity Hs molecular function 648 0.0
exon-exon junction complex Hs cellular component 218 2.20e-58
telomeric DNA binding Hs molecular function 218 2.20e-58
mitochondrial nucleoid Hs cellular component 181 1.20e-46
cell projection Hs cellular component 648 0.0
ribosome binding Hs molecular function 648 0.0
5'-3' DNA helicase activity Hs molecular function 181 1.20e-46
ATP-dependent 5'-3' DNA helicase activity Hs molecular function 648 0.0
single-stranded DNA-dependent ATPase activity Hs molecular function 181 1.20e-46
supraspliceosomal complex Hs cellular component 218 2.20e-58
metal ion binding Hs molecular function 648 0.0
iron-sulfur cluster binding Hs molecular function 181 1.20e-46
4 iron, 4 sulfur cluster binding Hs molecular function 181 1.20e-46

GO (InterProScan)

4 results

GO Term Analysis Type e-value
nucleic acid binding Gene3D molecular function 7.7E-19
DNA binding TIGRFAM molecular function 1.8E-181
ATP binding TIGRFAM molecular function 1.8E-181
zinc ion binding Pfam molecular function 7.4E-6

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