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GENE CARD

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  1. Pub 'PMID:15950613'

Gene Card

Best human hits

DIS3; DIS3L; DIS3L2

Species

M.occidentalis

Unique Gene ID

Moocci.g00005056

Gene Model ID

Moocci.CG.ELv1_2.S226137.g05056

Location

S226137:3257..6047

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S226137.g05056.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
PIN_dom SMART PIN domain
NA-bd_OB-fold SUPERFAMILY Nucleic acid-binding, OB-fold
PIN-like_dom_sf SUPERFAMILY PIN-like domain superfamily
PIN_dom Pfam PIN domain
Rrp44_CSD1 Pfam Rrp44-like cold shock domain
RNase_II/R_CS ProSitePatterns Ribonuclease II/R, conserved site
RRP44_S1 Pfam Exosome complex exonuclease RRP44, S1 domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
3'-5'-exoribonuclease activity Hs molecular function
nuclear exosome (RNase complex) Hs cellular component
exosome (RNase complex) Hs cellular component
RNA binding Hs molecular function
nuclease activity Hs molecular function
endonuclease activity Hs molecular function
exonuclease activity Hs molecular function
guanyl-nucleotide exchange factor activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
rRNA processing Hs biological process
membrane Hs cellular component
rRNA catabolic process Hs biological process
hydrolase activity Hs molecular function
regulation of mRNA stability Hs biological process
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay Hs biological process
regulation of molecular function Hs biological process
CUT catabolic process Hs biological process
nucleic acid phosphodiester bond hydrolysis Hs biological process
RNA phosphodiester bond hydrolysis, exonucleolytic Hs biological process

GO (Blast)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
3'-5'-exoribonuclease activity Hs molecular function 1104 0.0
nuclear exosome (RNase complex) Hs cellular component 1104 0.0
cytoplasmic exosome (RNase complex) Hs cellular component 505 2.17e-163
exosome (RNase complex) Hs cellular component 1104 0.0
magnesium ion binding Hs molecular function 290 2.45e-84
P-body Hs cellular component 290 2.45e-84
RNA binding Hs molecular function 1104 0.0
nuclease activity Hs molecular function 1104 0.0
endonuclease activity Hs molecular function 1104 0.0
exonuclease activity Hs molecular function 1104 0.0
ribonuclease activity Hs molecular function 290 2.45e-84
guanyl-nucleotide exchange factor activity Hs molecular function 1104 0.0
protein binding Hs molecular function 1104 0.0
nucleus Hs cellular component 1104 0.0
nucleoplasm Hs cellular component 1104 0.0
cytoplasm Hs cellular component 1104 0.0
centrosome Hs cellular component 505 2.17e-163
cytosol Hs cellular component 1104 0.0
polysome Hs cellular component 290 2.45e-84
plasma membrane Hs cellular component 505 2.17e-163
poly(U) RNA binding Hs molecular function 290 2.45e-84
membrane Hs cellular component 1104 0.0
hydrolase activity Hs molecular function 1104 0.0
enzyme binding Hs molecular function 505 2.17e-163
metal ion binding Hs molecular function 290 2.45e-84

GO (InterProScan)

No result

GO Term Analysis Type e-value