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GENE CARD

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Gene Card

Best human hits

RPS5

Species

M.occidentalis

Unique Gene ID

Moocci.g00002221

Gene Model ID

Moocci.CG.ELv1_2.S133099.g02221

Location

S133099:5946..10220

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S133099.g02221.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
Ribosomal_S5/S7 PIRSF Ribosomal protein S5/S7
Ribosomal_S5/S7 PANTHER Ribosomal protein S5/S7
Ribosomal_S7_dom_sf Gene3D Ribosomal protein S7 domain superfamily
Ribosomal_S7_dom_sf SUPERFAMILY Ribosomal protein S7 domain superfamily
Ribosomal_S7_dom Pfam Ribosomal protein S7 domain
Ribosomal_S5/S7_euk/arc TIGRFAM Ribosomal protein S5/S7, eukaryotic/archaeal
Ribosomal_S5/S7_euk/arc CDD Ribosomal protein S5/S7, eukaryotic/archaeal
Ribosomal_S7_CS ProSitePatterns Ribosomal protein S7, conserved site

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
ribosomal small subunit assembly Hs biological process
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Hs biological process
RNA binding Hs molecular function
mRNA binding Hs molecular function
structural constituent of ribosome Hs molecular function
protein binding Hs molecular function
nucleoplasm Hs cellular component
cytosol Hs cellular component
ribosome Hs cellular component
focal adhesion Hs cellular component
rRNA processing Hs biological process
translation Hs biological process
translational initiation Hs biological process
regulation of translational fidelity Hs biological process
SRP-dependent cotranslational protein targeting to membrane Hs biological process
small ribosomal subunit Hs cellular component
membrane Hs cellular component
rRNA binding Hs molecular function
cytosolic small ribosomal subunit Hs cellular component
intracellular ribonucleoprotein complex Hs cellular component
extracellular exosome Hs cellular component

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 372 3.51e-132
mRNA binding Hs molecular function 372 3.51e-132
structural constituent of ribosome Hs molecular function 372 3.51e-132
protein binding Hs molecular function 372 3.51e-132
nucleoplasm Hs cellular component 372 3.51e-132
cytosol Hs cellular component 372 3.51e-132
ribosome Hs cellular component 372 3.51e-132
focal adhesion Hs cellular component 372 3.51e-132
small ribosomal subunit Hs cellular component 372 3.51e-132
membrane Hs cellular component 372 3.51e-132
rRNA binding Hs molecular function 372 3.51e-132
cytosolic small ribosomal subunit Hs cellular component 372 3.51e-132
intracellular ribonucleoprotein complex Hs cellular component 372 3.51e-132
extracellular exosome Hs cellular component 372 3.51e-132

GO (InterProScan)

4 results

GO Term Analysis Type e-value
RNA binding ProSitePatterns molecular function
structural constituent of ribosome CDD molecular function 4.15929E-140
translation CDD biological process 4.15929E-140
small ribosomal subunit CDD cellular component 4.15929E-140