Gene Card
Best human hits
COL7A1; TNN; TNR
Species
Unique Gene ID
Moocci.g00001779
Gene Model ID
Moocci.CG.ELv1_2.S113689.g01779
Location
S113689:242..12825
Transcript Models and Sequences
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
11 results
| IPR Term | Analysis | Definition |
|---|---|---|
| FN3_dom | Pfam | Fibronectin type III |
| FN3_sf | SUPERFAMILY | Fibronectin type III superfamily |
| FN3_dom | ProSiteProfiles | Fibronectin type III |
| LCCL_sf | SUPERFAMILY | LCCL domain superfamily |
| FN3_dom | CDD | Fibronectin type III |
| Ig-like_fold | Gene3D | Immunoglobulin-like fold |
| LCCL | Pfam | LCCL domain |
| FN3_dom | SMART | Fibronectin type III |
| LCCL | ProSiteProfiles | LCCL domain |
| LCCL_sf | Gene3D | LCCL domain superfamily |
| LCCL | SMART | LCCL domain |
| GO Term | Annotation Origin | Type |
|---|
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
23 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| Golgi membrane | Hs | cellular component | 80.5 | 4.03e-15 |
| serine-type endopeptidase inhibitor activity | Hs | molecular function | 80.5 | 4.03e-15 |
| integrin binding | Hs | molecular function | 98.2 | 1.01e-20 |
| protein binding | Hs | molecular function | 98.2 | 1.01e-20 |
| extracellular region | Hs | cellular component | 98.2 | 1.01e-20 |
| proteinaceous extracellular matrix | Hs | cellular component | 98.2 | 1.01e-20 |
| collagen trimer | Hs | cellular component | 80.5 | 4.03e-15 |
| collagen type VII trimer | Hs | cellular component | 80.5 | 4.03e-15 |
| basement membrane | Hs | cellular component | 80.5 | 4.03e-15 |
| extracellular space | Hs | cellular component | 80.5 | 4.03e-15 |
| endoplasmic reticulum lumen | Hs | cellular component | 80.5 | 4.03e-15 |
| cell surface | Hs | cellular component | 98.2 | 1.01e-20 |
| COPII-coated ER to Golgi transport vesicle | Hs | cellular component | 80.5 | 4.03e-15 |
| peptidase inhibitor activity | Hs | molecular function | 80.5 | 4.03e-15 |
| extracellular matrix | Hs | cellular component | 80.5 | 4.03e-15 |
| endoplasmic reticulum-Golgi intermediate compartment membrane | Hs | cellular component | 80.5 | 4.03e-15 |
| identical protein binding | Hs | molecular function | 98.2 | 1.01e-20 |
| neuron projection | Hs | cellular component | 98.2 | 1.01e-20 |
| neuronal cell body | Hs | cellular component | 98.2 | 1.01e-20 |
| membrane raft | Hs | cellular component | 80.9 | 2.70e-15 |
| perineuronal net | Hs | cellular component | 80.9 | 2.70e-15 |
| CA3 pyramidal cell dendrite | Hs | cellular component | 98.2 | 1.01e-20 |
| hippocampal mossy fiber expansion | Hs | cellular component | 98.2 | 1.01e-20 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| protein binding | SUPERFAMILY | molecular function | 3.3E-16 |
