Aniseed - Gene card

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000002517

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl002e04

Plate: R1CiGC08g08

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

16 results

ZicL -658/codon 7 REG00000033 [ regulatory_region (extended_promoter) ]

Ci-PTFb -1665/-1407 REG00000344 [ inactive_region ]

Cirobu.REG.KH2012.S816:16094-18001|Zicl REG00001191 [ regulatory_region (extended_promoter) ]

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Znf_C2H2_type	ProSitePatterns	Zinc finger C2H2-type
Znf_C2H2_type	ProSiteProfiles	Zinc finger C2H2-type
Znf_C2H2_type	SMART	Zinc finger C2H2-type
Znf_C2H2_sf	SUPERFAMILY	Zinc finger C2H2 superfamily

GOSlim

36 results

GO Term	Annotation Origin	Type
RNA polymerase II regulatory region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
nucleic acid binding	Orthology	molecular function
DNA binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
multicellular organism development	Orthology	biological process
nervous system development	Orthology	biological process
brain development	Orthology	biological process
visual perception	Orthology	biological process
nuclear body	Orthology	cellular component
cell differentiation	Orthology	biological process
sequence-specific DNA binding	Orthology	molecular function
negative regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
metal ion binding	Orthology	molecular function
central nervous system development	Orthology	biological process
heart development	Orthology	biological process
anatomical structure morphogenesis	Orthology	biological process
animal organ development	Orthology	biological process
chromatin binding	Orthology	molecular function
developmental process	Orthology	biological process
system development	Orthology	biological process
cell surface receptor signaling pathway	Orthology	biological process
regulation of signal transduction	Orthology	biological process
intracellular protein transport	Orthology	biological process
establishment of protein localization to organelle	Orthology	biological process

GO (Orthology)

44 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
heart looping	Hs	biological process
nucleic acid binding	Hs	molecular function
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
multicellular organism development	Hs	biological process
determination of left/right symmetry	Hs	biological process
pattern specification process	Hs	biological process
nervous system development	Hs	biological process
brain development	Hs	biological process
visual perception	Hs	biological process
anterior/posterior pattern specification	Hs	biological process
nuclear body	Hs	cellular component
cell differentiation	Hs	biological process
lung development	Hs	biological process
chromatin DNA binding	Hs	molecular function
somatic stem cell population maintenance	Hs	biological process
determination of pancreatic left/right asymmetry	Hs	biological process
determination of left/right asymmetry in nervous system	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
negative regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
metal ion binding	Hs	molecular function
positive regulation of sequence-specific DNA binding transcription factor activity	Hs	biological process
determination of digestive tract left/right asymmetry	Hs	biological process
determination of liver left/right asymmetry	Hs	biological process
central nervous system development	Hs	biological process
adult walking behavior	Hs	biological process
regulation of smoothened signaling pathway	Hs	biological process
spinal cord development	Hs	biological process
positive regulation of protein import into nucleus	Hs	biological process
inner ear morphogenesis	Hs	biological process

GO (Blast)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	244	1.25e-76
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	244	1.25e-76
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	241	9.11e-75
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	244	1.25e-76
nucleic acid binding	Hs	molecular function	244	1.25e-76
DNA binding	Hs	molecular function	244	1.25e-76
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	244	1.25e-76
protein binding	Hs	molecular function	244	1.25e-76
nucleus	Hs	cellular component	244	1.25e-76
nucleoplasm	Hs	cellular component	244	1.25e-76
cytoplasm	Hs	cellular component	244	1.25e-76
nuclear body	Hs	cellular component	241	9.11e-75
chromatin DNA binding	Hs	molecular function	241	9.11e-75
sequence-specific DNA binding	Hs	molecular function	244	1.25e-76
metal ion binding	Hs	molecular function	244	1.25e-76

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
nucleic acid binding	SMART	molecular function	1.0E-4

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences

External database links

Gateway full ORF

cien71652

cien149416

Gene collection 1 (N. Satoh)

cicl002e04

Regulatory Regions

InterPro

GOSlim

GO (Orthology)

GO (Blast)

GO (InterProScan)