Aniseed - Gene card

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000000442
NCBI Reference Sequence	XM_002129675.2
NCBI Reference Sequence	XM_018817084.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg024g13

Plate: R1CiGC19k18

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Collagen	Pfam	Collagen triple helix repeat
Tumour_necrosis_fac-like_dom	SUPERFAMILY	Tumour necrosis factor-like domain superfamily
TNF_dom	ProSiteProfiles	Tumour necrosis factor domain
TNF_dom	Pfam	Tumour necrosis factor domain
Tumour_necrosis_fac-like_dom	Gene3D	Tumour necrosis factor-like domain superfamily

GOSlim

38 results

GO Term	Annotation Origin	Type
receptor binding	Orthology	molecular function
protein binding	Orthology	molecular function
extracellular region	Orthology	cellular component
extracellular space	Blast	cellular component
endoplasmic reticulum	Blast	cellular component
endoplasmic reticulum membrane	Orthology	cellular component
cytoskeleton	Orthology	cellular component
plasma membrane	Orthology	cellular component
integral component of plasma membrane	Orthology	cellular component
immune response	Orthology	biological process
multicellular organism development	Orthology	biological process
positive regulation of signal transduction	Orthology	biological process
cell surface	Blast	cellular component
gene expression	Orthology	biological process
positive regulation of gene expression	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
cell differentiation	Orthology	biological process
identical protein binding	Blast	molecular function
protein homodimerization activity	Blast	molecular function
intracellular membrane-bounded organelle	Orthology	cellular component
apical part of cell	Orthology	cellular component
extracellular exosome	Blast	cellular component
positive regulation of canonical Wnt signaling pathway	Orthology	biological process
macromolecular complex	Orthology	cellular component
intracellular non-membrane-bounded organelle	Orthology	cellular component
cell adhesion	Orthology	biological process
cytokine-mediated signaling pathway	Orthology	biological process
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
intracellular signal transduction	Orthology	biological process
animal organ development	Orthology	biological process
anatomical structure formation involved in morphogenesis	Orthology	biological process
molecular function regulator	Blast	molecular function
regulation of signal transduction	Blast	biological process
signaling receptor activity	Blast	molecular function
small molecule binding	Blast	molecular function
anion binding	Blast	molecular function
carbohydrate derivative binding	Blast	molecular function

GO (Orthology)

28 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
receptor binding	Hs	molecular function
tumor necrosis factor receptor binding	Hs	molecular function
protein binding	Hs	molecular function
extracellular region	Hs	cellular component
collagen trimer	Hs	cellular component
endoplasmic reticulum membrane	Hs	cellular component
lipid droplet	Hs	cellular component
cytoskeleton	Hs	cellular component
plasma membrane	Hs	cellular component
integral component of plasma membrane	Hs	cellular component
immune response	Hs	biological process
cell-matrix adhesion	Hs	biological process
multicellular organism development	Hs	biological process
gene expression	Hs	biological process
positive regulation of gene expression	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
cell differentiation	Hs	biological process
tumor necrosis factor-mediated signaling pathway	Hs	biological process
positive regulation of I-kappaB kinase/NF-kappaB signaling	Hs	biological process
intracellular membrane-bounded organelle	Hs	cellular component
pigmentation	Hs	biological process
skin development	Hs	biological process
apical part of cell	Hs	cellular component
positive regulation of NF-kappaB transcription factor activity	Hs	biological process
salivary gland cavitation	Hs	biological process
trachea gland development	Hs	biological process
positive regulation of canonical Wnt signaling pathway	Hs	biological process

GO (Blast)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
receptor binding	Hs	molecular function	62.0	1.66e-10
cytokine activity	Hs	molecular function	52.0	1.17e-07
tumor necrosis factor receptor binding	Hs	molecular function	62.0	1.66e-10
hormone activity	Hs	molecular function	52.0	1.17e-07
protein binding	Hs	molecular function	62.0	1.66e-10
extracellular region	Hs	cellular component	62.0	1.66e-10
collagen trimer	Hs	cellular component	62.0	1.66e-10
extracellular space	Hs	cellular component	52.0	1.17e-07
endoplasmic reticulum	Hs	cellular component	52.0	1.17e-07
endoplasmic reticulum membrane	Hs	cellular component	62.0	1.66e-10
lipid droplet	Hs	cellular component	62.0	1.66e-10
cytoskeleton	Hs	cellular component	62.0	1.66e-10
plasma membrane	Hs	cellular component	62.0	1.66e-10
integral component of plasma membrane	Hs	cellular component	62.0	1.66e-10
cell surface	Hs	cellular component	52.0	1.17e-07
membrane	Hs	cellular component	62.0	1.66e-10
integral component of membrane	Hs	cellular component	62.0	1.66e-10
sialic acid binding	Hs	molecular function	52.0	1.17e-07
identical protein binding	Hs	molecular function	52.0	1.17e-07
protein homodimerization activity	Hs	molecular function	52.0	1.17e-07
intracellular membrane-bounded organelle	Hs	cellular component	62.0	1.66e-10
apical part of cell	Hs	cellular component	62.0	1.66e-10
extracellular exosome	Hs	cellular component	52.0	1.17e-07

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
tumor necrosis factor receptor binding	Pfam	molecular function	2.1E-4
protein binding	Gene3D	molecular function	1.4E-24
immune response	Pfam	biological process	2.1E-4
membrane	Pfam	cellular component	2.1E-4

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences