Aniseed - Gene card

Gene 'KH2012:KH.S1552.1'

Gene Card

Best human hits

HPD; HPDL

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00013947

Gene Model ID

KH2012:KH.S1552.1

Location

KhS1552:254..4071

Transcript Models and Sequences

KH2012:KH.S1552.1.v1.A.nonSL4-1
KH2012:KH.S1552.1.v1.A.nonSL5-1
KH2012:KH.S1552.1.v1.A.nonSL6-1
KH2012:KH.S1552.1.v1.A.SL2-1
KH2012:KH.S1552.1.v2.A.SL1-1
KH2012:KH.S1552.1.v3.A.SL3-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000005482
NCBI Reference Sequence	XM_002125668.2

Collections

Gateway full ORF

4 results

Gene collection 1 (N. Satoh)

1 result

cieg099d06

Plate: R1CiGC40l20

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Glyas_Bleomycin-R_OHBP_Dase	Gene3D	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Glyas_Bleomycin-R_OHBP_Dase	SUPERFAMILY	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
VOC	ProSiteProfiles	Vicinal oxygen chelate (VOC) domain
4OHPhenylPyrv_dOase	PANTHER	4-hydroxyphenylpyruvate dioxygenase
Glyas_Fos-R_dOase_dom	Pfam	Glyoxalase/fosfomycin resistance/dioxygenase domain

GOSlim

11 results

GO Term	Annotation Origin	Type
Golgi membrane	Orthology	cellular component
endoplasmic reticulum	Orthology	cellular component
endoplasmic reticulum membrane	Orthology	cellular component
Golgi apparatus	Orthology	cellular component
cytosol	Orthology	cellular component
metal ion binding	Orthology	molecular function
oxidation-reduction process	Orthology	biological process
extracellular exosome	Orthology	cellular component
catalytic activity	Orthology	molecular function
aromatic compound catabolic process	Orthology	biological process
cellular aromatic compound metabolic process	Orthology	biological process

GO (Orthology)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
Golgi membrane	Hs	cellular component
4-hydroxyphenylpyruvate dioxygenase activity	Hs	molecular function
endoplasmic reticulum	Hs	cellular component
endoplasmic reticulum membrane	Hs	cellular component
Golgi apparatus	Hs	cellular component
cytosol	Hs	cellular component
L-phenylalanine catabolic process	Hs	biological process
tyrosine catabolic process	Hs	biological process
aromatic amino acid family metabolic process	Hs	biological process
oxidoreductase activity	Hs	molecular function
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	Hs	molecular function
metal ion binding	Hs	molecular function
dioxygenase activity	Hs	molecular function
oxidation-reduction process	Hs	biological process
extracellular exosome	Hs	cellular component

GO (Blast)