Aniseed - Gene card

Gene Card

Best human hits

AGAP3; SMAP1; SMAP2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00013876

Gene Model ID

KH2012:KH.S1446.2

Location

KhS1446:1318..5757

Transcript Models and Sequences

External Database Gene Card

External database links

1 result

Database	Gene ID
NCBI Reference Sequence	NM_001128112.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl008p04

Plate: R1CiGC09i16

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
ArfGAP_dom	PRINTS	Arf GTPase activating protein
ArfGAP_dom	SMART	Arf GTPase activating protein
ArfGAP_dom	Pfam	Arf GTPase activating protein
ArfGAP_dom	ProSiteProfiles	Arf GTPase activating protein
ARFGAP/RecO	SUPERFAMILY	ARFGAP/RecO-like zinc finger
ArfGAP_dom_sf	Gene3D	ArfGAP domain superfamily

GOSlim

15 results

GO Term	Annotation Origin	Type
nucleotide binding	Blast	molecular function
GTPase activity	Blast	molecular function
GTPase activator activity	Orthology	molecular function
protein binding	Orthology	molecular function
GTP binding	Blast	molecular function
cytoplasm	Orthology	cellular component
plasma membrane	Orthology	cellular component
membrane	Orthology	cellular component
positive regulation of GTPase activity	Orthology	biological process
metal ion binding	Orthology	molecular function
immune system process	Orthology	biological process
animal organ development	Orthology	biological process
cell differentiation	Orthology	biological process
membrane organization	Orthology	biological process
organelle organization	Orthology	biological process

GO (Orthology)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
GTPase activator activity	Hs	molecular function
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
plasma membrane	Hs	cellular component
membrane	Hs	cellular component
clathrin binding	Hs	molecular function
positive regulation of GTPase activity	Hs	biological process
positive regulation of erythrocyte differentiation	Hs	biological process
metal ion binding	Hs	molecular function
regulation of clathrin-dependent endocytosis	Hs	biological process

GO (Blast)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	103	4.96e-24
GTPase activity	Hs	molecular function	103	4.96e-24
GTPase activator activity	Hs	molecular function	172	4.83e-49
protein binding	Hs	molecular function	167	1.25e-47
GTP binding	Hs	molecular function	103	4.96e-24
cytoplasm	Hs	cellular component	172	4.83e-49
plasma membrane	Hs	cellular component	172	4.83e-49
membrane	Hs	cellular component	172	4.83e-49
clathrin binding	Hs	molecular function	172	4.83e-49
metal ion binding	Hs	molecular function	172	4.83e-49

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
GTPase activator activity	Pfam	molecular function	3.8E-38

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences

External database links

Gateway full ORF

cima815873

cien144804

Gene collection 1 (N. Satoh)

cicl008p04

Regulatory Regions

InterPro

GOSlim

GO (Orthology)

GO (Blast)

GO (InterProScan)