Login
Help

GENE CARD

Submit your Data

  1. Gene 'KH2012:KH.L46.13'

Gene Card

Best human hits

GBE1

Unique Gene ID

Cirobu.g00012682

Gene Model ID

KH2012:KH.L46.13

Location

KhL46:9721..13002

Transcript Models and Sequences

  KH2012:KH.L46.13.v1.A.ND1-1

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
A-amylase/branching_C Pfam Alpha-amylase/branching enzyme, C-terminal all beta
Glyco_hydro_13_cat_dom SMART Glycosyl hydrolase, family 13, catalytic domain
Glyco_hydro_13_cat_dom Pfam Glycosyl hydrolase, family 13, catalytic domain
Branching_enzy PANTHER 1,4-alpha-glucan-branching enzyme
Branching_enzy PIRSF 1,4-alpha-glucan-branching enzyme
Ig_E-set SUPERFAMILY Immunoglobulin E-set
Glyco_hydro_b Gene3D Glycosyl hydrolase, all-beta
Glyco_hydro_13_N Pfam Glycoside hydrolase, family 13, N-terminal
Ig-like_fold Gene3D Immunoglobulin-like fold
Glycoside_hydrolase_SF SUPERFAMILY Glycoside hydrolase superfamily

GOSlim

10 results

GO Term Annotation Origin Type
catalytic activity Blast molecular function
protein binding Blast molecular function
cytosol Blast cellular component
transferase activity Blast molecular function
cation binding Blast molecular function
extracellular exosome Blast cellular component
hydrolase activity Blast molecular function
binding Blast molecular function
organic substance metabolic process InterProScan biological process
oxidation-reduction process InterProScan biological process

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
catalytic activity Hs molecular function 653 0.0
1,4-alpha-glucan branching enzyme activity Hs molecular function 653 0.0
hydrolase activity, hydrolyzing O-glycosyl compounds Hs molecular function 653 0.0
protein binding Hs molecular function 653 0.0
cytosol Hs cellular component 653 0.0
transferase activity Hs molecular function 653 0.0
transferase activity, transferring glycosyl groups Hs molecular function 653 0.0
carbohydrate binding Hs molecular function 653 0.0
cation binding Hs molecular function 653 0.0
extracellular exosome Hs cellular component 653 0.0
1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis) Hs molecular function 653 0.0

GO (InterProScan)

6 results

GO Term Analysis Type e-value
catalytic activity Pfam molecular function 6.5E-21
1,4-alpha-glucan branching enzyme activity PANTHER molecular function 9.6E-251
hydrolase activity, hydrolyzing O-glycosyl compounds Pfam molecular function 7.6E-7
carbohydrate metabolic process Pfam biological process 6.5E-21
glycogen biosynthetic process PANTHER biological process 9.6E-251
cation binding Pfam molecular function 6.5E-21