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Gene Card

Best human hits

TGM1; TGM2; TGM3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00012433

Gene Model ID

KH2012:KH.L37.67

Location

KhL37:168296..179134

Transcript Models and Sequences

  KH2012:KH.L37.67.v1.A.SL1-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000000478
NCBI Reference Sequence NM_001032540.1
NCBI Reference Sequence XM_009863288.2
Collections

Gateway full ORF

3 results

cima816384

Plate: VES59_P01

cima836330

Plate: VES62_O22

cima836653

Plate: VES63_C02

Gene collection 1 (N. Satoh)

3 results

citb035n24

Plate: R1CiGC32c04

cilv027h07

Plate: R1CiGC27i20

citb080j04

Plate: R1CiGC46o24

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
Transglutaminase_N Pfam Transglutaminase, N-terminal
Ig-like_fold Gene3D Immunoglobulin-like fold
Ig_E-set SUPERFAMILY Immunoglobulin E-set
Transglutaminase_animal PIRSF Protein-glutamine gamma-glutamyltransferase, animal
Transglutaminase-like SMART Transglutaminase-like
Transglutaminase-like_sf Gene3D Transglutaminase-like superfamily
Transglutaminase_C_sf SUPERFAMILY Transglutaminase, C-terminal domain superfamily
Transglutaminase-like Pfam Transglutaminase-like

GOSlim

47 results

GO Term Annotation Origin Type
catalytic activity Orthology molecular function
calcium ion binding Orthology molecular function
protein binding Orthology molecular function
GTP binding Orthology molecular function
cytoplasm Orthology cellular component
mitochondrion Orthology cellular component
endoplasmic reticulum Orthology cellular component
cytosol Orthology cellular component
plasma membrane Orthology cellular component
focal adhesion Orthology cellular component
cellular protein modification process Orthology biological process
membrane Orthology cellular component
transferase activity Orthology molecular function
intrinsic component of membrane Blast cellular component
intrinsic component of plasma membrane Orthology cellular component
positive regulation of apoptotic process Orthology biological process
metal ion binding Orthology molecular function
protein homooligomerization Orthology biological process
extracellular exosome Orthology cellular component
cell morphogenesis Orthology biological process
ATP binding Orthology molecular function
cytoskeleton Orthology cellular component
intracellular signal transduction Orthology biological process
G-protein coupled receptor signaling pathway Orthology biological process
positive regulation of hydrolase activity Orthology biological process
animal organ development Orthology biological process
cell differentiation Orthology biological process
extracellular region part Orthology cellular component
intracellular part Orthology cellular component
plasma membrane part Orthology cellular component
cellular process Orthology biological process
transcription factor activity, sequence-specific DNA binding Orthology molecular function
positive regulation of signal transduction Orthology biological process
cell adhesion Orthology biological process
defense response Orthology biological process
protein oligomerization Orthology biological process
anatomical structure formation involved in morphogenesis Orthology biological process
membrane organization Orthology biological process
programmed cell death Orthology biological process
organelle organization Orthology biological process
structural molecule activity Orthology molecular function
anatomical structure development Orthology biological process
protein metabolic process Orthology biological process
cytoplasmic part Orthology cellular component
cell periphery Orthology cellular component
cell development Orthology biological process
immune system process Orthology biological process

GO (Orthology)

48 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
protein-glutamine gamma-glutamyltransferase activity Hs molecular function
catalytic activity Hs molecular function
calcium ion binding Hs molecular function
protein binding Hs molecular function
GTP binding Hs molecular function
cytoplasm Hs cellular component
mitochondrion Hs cellular component
endoplasmic reticulum Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
focal adhesion Hs cellular component
cellular protein modification process Hs biological process
phospholipase C-activating G-protein coupled receptor signaling pathway Hs biological process
membrane Hs cellular component
transferase activity Hs molecular function
transferase activity, transferring acyl groups Hs molecular function
peptide cross-linking Hs biological process
protein domain specific binding Hs molecular function
keratinocyte differentiation Hs biological process
extracellular matrix Hs cellular component
intrinsic component of plasma membrane Hs cellular component
extrinsic component of cytoplasmic side of plasma membrane Hs cellular component
negative regulation of endoplasmic reticulum calcium ion concentration Hs biological process
positive regulation of apoptotic process Hs biological process
positive regulation of I-kappaB kinase/NF-kappaB signaling Hs biological process
apoptotic cell clearance Hs biological process
positive regulation of cell adhesion Hs biological process
metal ion binding Hs molecular function
positive regulation of inflammatory response Hs biological process
protein homooligomerization Hs biological process
protein tetramerization Hs biological process
positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway Hs biological process
positive regulation of mitochondrial calcium ion concentration Hs biological process
salivary gland cavitation Hs biological process
extracellular exosome Hs cellular component
cornification Hs biological process
cell morphogenesis Hs biological process
structural constituent of cytoskeleton Hs molecular function
ATP binding Hs molecular function
cytoskeleton Hs cellular component
cytoskeleton organization Hs biological process
regulation of cell shape Hs biological process
epidermis development Hs biological process
hemoglobin metabolic process Hs biological process
cortical cytoskeleton Hs cellular component
erythrocyte maturation Hs biological process
ion homeostasis Hs biological process
iron ion homeostasis Hs biological process

GO (Blast)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
cornified envelope Hs cellular component 435 2.59e-141
protein-glutamine gamma-glutamyltransferase activity Hs molecular function 456 7.94e-151
catalytic activity Hs molecular function 423 3.15e-138
calcium ion binding Hs molecular function 423 3.15e-138
protein binding Hs molecular function 456 7.94e-151
GTP binding Hs molecular function 456 7.94e-151
cytoplasm Hs cellular component 456 7.94e-151
mitochondrion Hs cellular component 456 7.94e-151
endoplasmic reticulum Hs cellular component 456 7.94e-151
cytosol Hs cellular component 456 7.94e-151
plasma membrane Hs cellular component 456 7.94e-151
focal adhesion Hs cellular component 456 7.94e-151
membrane Hs cellular component 435 2.59e-141
transferase activity Hs molecular function 456 7.94e-151
transferase activity, transferring acyl groups Hs molecular function 456 7.94e-151
protein domain specific binding Hs molecular function 456 7.94e-151
extracellular matrix Hs cellular component 456 7.94e-151
intrinsic component of membrane Hs cellular component 435 2.59e-141
intrinsic component of plasma membrane Hs cellular component 456 7.94e-151
extrinsic component of cytoplasmic side of plasma membrane Hs cellular component 423 3.15e-138
metal ion binding Hs molecular function 456 7.94e-151
extracellular exosome Hs cellular component 456 7.94e-151

GO (InterProScan)

2 results

GO Term Analysis Type e-value
protein-glutamine gamma-glutamyltransferase activity PIRSF molecular function 6.8E-217
peptide cross-linking PIRSF biological process 6.8E-217

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