Aniseed - Gene card

Gene 'KH2012:KH.L37.6'

Gene Card

Best human hits

MDP1; NEDD8-MDP1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00012425

Gene Model ID

KH2012:KH.L37.6

Location

KhL37:185189..186901

Transcript Models and Sequences

KH2012:KH.L37.6.v1.A.nonSL4-1
KH2012:KH.L37.6.v1.A.nonSL5-1
KH2012:KH.L37.6.v1.A.SL1-1
KH2012:KH.L37.6.v1.A.SL2-1
KH2012:KH.L37.6.v1.A.SL3-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000016761
NCBI Reference Sequence	XM_002130241.4
NCBI Reference Sequence	XM_004227102.3

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg015p16

Plate: R1CiGC17p24

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
MDP_1_eu_arc	Pfam	Magnesium-dependent phosphatase-1, eukaryotic/archaeal-type
MDP-1_euk	CDD	Magnesium-dependent phosphatase-1, eukaryotic-type
HAD_sf	Gene3D	HAD superfamily
HAD_SF_ppase_IIIC	TIGRFAM	HAD-superfamily phosphatase, subfamily IIIC
HAD-like_sf	SUPERFAMILY	HAD-like superfamily
MDP_1_eu_arc	TIGRFAM	Magnesium-dependent phosphatase-1, eukaryotic/archaeal-type
MDP_1_eu_arc	PANTHER	Magnesium-dependent phosphatase-1, eukaryotic/archaeal-type

GOSlim

6 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
protein dephosphorylation	Orthology	biological process
dephosphorylation	Orthology	biological process
hydrolase activity	Orthology	molecular function
metal ion binding	Orthology	molecular function
extracellular exosome	Orthology	cellular component

GO (Orthology)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
phosphoprotein phosphatase activity	Hs	molecular function
protein tyrosine phosphatase activity	Hs	molecular function
protein binding	Hs	molecular function
protein dephosphorylation	Hs	biological process
dephosphorylation	Hs	biological process
hydrolase activity	Hs	molecular function
phosphatase activity	Hs	molecular function
peptidyl-tyrosine dephosphorylation	Hs	biological process
metal ion binding	Hs	molecular function
extracellular exosome	Hs	cellular component

GO (Blast)