Aniseed - Gene card

Gene 'KH2012:KH.L170.31'

Gene Card

Best human hits

ALG11; ALG2; GLT1D1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00011767

Gene Model ID

KH2012:KH.L170.31

Location

KhL170:629234..633875

Transcript Models and Sequences

KH2012:KH.L170.31.v1.A.SL2-3
KH2012:KH.L170.31.v1.A.SL3-3
KH2012:KH.L170.31.v1.A.SL5-3
KH2012:KH.L170.31.v2.A.SL2-2
KH2012:KH.L170.31.v2.A.SL3-2
KH2012:KH.L170.31.v2.A.SL5-2
KH2012:KH.L170.31.v3.A.ND1-2
KH2012:KH.L170.31.v4.A.ND1-1
KH2012:KH.L170.31.v5.A.ND1-3
KH2012:KH.L170.31.v6.A.SL2-1
KH2012:KH.L170.31.v6.A.SL3-1
KH2012:KH.L170.31.v6.A.SL5-1
KH2012:KH.L170.31.v7.A.SL4-2
KH2012:KH.L170.31.v8.A.SL4-1

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000000711

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg016g15

Plate: R1CiGC18c13

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
Glyco_trans_4-like_N	Pfam	Glycosyltransferase subfamily 4-like, N-terminal domain
Glyco_trans_1	Pfam	Glycosyl transferase, family 1
ALG2	CDD	Alpha-1,3/1,6-mannosyltransferase ALG2

GOSlim

16 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
extracellular region	Blast	cellular component
nucleus	Orthology	cellular component
cytoplasm	Orthology	cellular component
endoplasmic reticulum	Orthology	cellular component
endoplasmic reticulum membrane	Orthology	cellular component
cytosol	Orthology	cellular component
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
transferase activity	Orthology	molecular function
protein heterodimerization activity	Orthology	molecular function
protein N-terminus binding	Orthology	molecular function
perinuclear region of cytoplasm	Orthology	cellular component
metabolic process	Orthology	biological process
cellular protein modification process	Orthology	biological process
cytoskeleton	Orthology	cellular component

GO (Orthology)

22 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
alpha-1,3-mannosyltransferase activity	Hs	molecular function
GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
endoplasmic reticulum membrane	Hs	cellular component
cytosol	Hs	cellular component
protein glycosylation	Hs	biological process
dolichol-linked oligosaccharide biosynthetic process	Hs	biological process
actin cytoskeleton	Hs	cellular component
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
transferase activity	Hs	molecular function
transferase activity, transferring glycosyl groups	Hs	molecular function
protein glycosylation in endoplasmic reticulum	Hs	biological process
protein heterodimerization activity	Hs	molecular function
protein N-terminus binding	Hs	molecular function
calcium-dependent protein binding	Hs	molecular function
perinuclear region of cytoplasm	Hs	cellular component
response to calcium ion	Hs	biological process
mannosylation	Hs	biological process
GDP-Man:Man2GlcNAc2-PP-dolichol alpha-1,6-mannosyltransferase activity	Hs	molecular function

GO (Blast)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
alpha-1,3-mannosyltransferase activity	Hs	molecular function	446	1.08e-155
GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity	Hs	molecular function	67.0	5.86e-12
GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase activity	Hs	molecular function	446	1.08e-155
protein binding	Hs	molecular function	446	1.08e-155
extracellular region	Hs	cellular component	42.4	3.46e-04
nucleus	Hs	cellular component	446	1.08e-155
cytoplasm	Hs	cellular component	446	1.08e-155
endoplasmic reticulum	Hs	cellular component	67.0	5.86e-12
endoplasmic reticulum membrane	Hs	cellular component	446	1.08e-155
cytosol	Hs	cellular component	446	1.08e-155
actin cytoskeleton	Hs	cellular component	446	1.08e-155
membrane	Hs	cellular component	446	1.08e-155
integral component of membrane	Hs	cellular component	446	1.08e-155
transferase activity	Hs	molecular function	446	1.08e-155
transferase activity, transferring glycosyl groups	Hs	molecular function	446	1.08e-155
protein heterodimerization activity	Hs	molecular function	446	1.08e-155
protein N-terminus binding	Hs	molecular function	446	1.08e-155
calcium-dependent protein binding	Hs	molecular function	446	1.08e-155
perinuclear region of cytoplasm	Hs	cellular component	446	1.08e-155
GDP-Man:Man2GlcNAc2-PP-dolichol alpha-1,6-mannosyltransferase activity	Hs	molecular function	446	1.08e-155

GO (InterProScan)