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GENE CARD

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Gene Card

Best human hits

SLC6A11; SLC6A12; SLC6A13

Unique Gene ID

Cirobu.g00011713

Gene Model ID

KH2012:KH.L167.5

Location

KhL167:3860..11724

Transcript Models and Sequences

  KH2012:KH.L167.5.v1.A.SL1-1

External Database Gene Card
Collections

Gateway full ORF

2 results

cien36753

Plate: VES76_I03

cien194315

Plate: VES100_B11

Gene collection 1 (N. Satoh)

1 result

ciad066g20

Plate: R1CiGC06n03

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Na/ntran_symport PRINTS Sodium:neurotransmitter symporter
Na/ntran_symport ProSitePatterns Sodium:neurotransmitter symporter
SNS_sf SUPERFAMILY Sodium:neurotransmitter symporter superfamily
Na/ntran_symport Pfam Sodium:neurotransmitter symporter
Na/ntran_symport ProSiteProfiles Sodium:neurotransmitter symporter
Na/ntran_symport PANTHER Sodium:neurotransmitter symporter

GOSlim

14 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
cytoplasm Orthology cellular component
plasma membrane Orthology cellular component
integral component of plasma membrane Orthology cellular component
brain development Orthology biological process
membrane Orthology cellular component
integral component of membrane Orthology cellular component
cell projection Orthology cellular component
transmembrane transport Orthology biological process
extracellular exosome Orthology cellular component
organic substance transport Orthology biological process
ion transport Orthology biological process
sodium ion transport Orthology biological process
binding Orthology molecular function

GO (Orthology)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
amino acid transmembrane transport Hs biological process
transporter activity Hs molecular function
neurotransmitter:sodium symporter activity Hs molecular function
gamma-aminobutyric acid:sodium symporter activity Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
plasma membrane Hs cellular component
integral component of plasma membrane Hs cellular component
neurotransmitter transport Hs biological process
amino acid transport Hs biological process
brain development Hs biological process
amino acid transmembrane transporter activity Hs molecular function
symporter activity Hs molecular function
gamma-aminobutyric acid transport Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
neurotransmitter binding Hs molecular function
response to drug Hs biological process
cell projection Hs cellular component
transmembrane transport Hs biological process
extracellular exosome Hs cellular component

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
transporter activity Hs molecular function 581 0.0
neurotransmitter:sodium symporter activity Hs molecular function 581 0.0
gamma-aminobutyric acid:sodium symporter activity Hs molecular function 581 0.0
protein binding Hs molecular function 567 0.0
cytoplasm Hs cellular component 581 0.0
plasma membrane Hs cellular component 581 0.0
integral component of plasma membrane Hs cellular component 581 0.0
amino acid transmembrane transporter activity Hs molecular function 567 0.0
symporter activity Hs molecular function 581 0.0
membrane Hs cellular component 581 0.0
integral component of membrane Hs cellular component 581 0.0
neurotransmitter binding Hs molecular function 581 0.0
cell projection Hs cellular component 581 0.0
extracellular exosome Hs cellular component 575 0.0

GO (InterProScan)

3 results

GO Term Analysis Type e-value
neurotransmitter:sodium symporter activity PANTHER molecular function 3.5E-269
neurotransmitter transport PANTHER biological process 3.5E-269
integral component of membrane PANTHER cellular component 3.5E-269