Aniseed - Gene card

Gene Card

Best human hits

NEK4; STKLD1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00011300

Gene Model ID

KH2012:KH.L147.20

Location

KhL147:286446..298744

Transcript Models and Sequences

KH2012:KH.L147.20.v1.A.SL1-1
KH2012:KH.L147.20.v2.A.ND2-1

External Database Gene Card

External database links

5 results

Database	Gene ID
ENSEMBL	ENSCING00000021081
ENSEMBL	ENSCING00000022987
ENSEMBL	ENSCING00000023510
NCBI Reference Sequence	XM_018815360.1
NCBI Reference Sequence	XM_018815361.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

cign034f02

Plate: R1CiGC42e02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term	Analysis	Definition
Prot_kinase_dom	SMART	Protein kinase domain
Armadillo	SMART	Armadillo
Prot_kinase_dom	Pfam	Protein kinase domain
Prot_kinase_dom	ProSiteProfiles	Protein kinase domain
Armadillo	ProSiteProfiles	Armadillo
ARM-type_fold	SUPERFAMILY	Armadillo-type fold
Ser/Thr_kinase_AS	ProSitePatterns	Serine/threonine-protein kinase, active site
ARM-like	Gene3D	Armadillo-like helical
Kinase-like_dom_sf	SUPERFAMILY	Protein kinase-like domain superfamily

GOSlim

22 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
protein kinase activity	Orthology	molecular function
protein serine/threonine kinase activity	Orthology	molecular function
binding	Orthology	molecular function
protein binding	Blast	molecular function
ATP binding	Orthology	molecular function
cytoplasm	Blast	cellular component
cytosol	Blast	cellular component
protein phosphorylation	Orthology	biological process
kinase activity	Blast	molecular function
transferase activity	Blast	molecular function
cell projection	Blast	cellular component
metal ion binding	Blast	molecular function
organelle	Blast	cellular component
plasma membrane region	Blast	cellular component
macromolecular complex	Blast	cellular component
transition metal ion binding	Blast	molecular function
cell projection part	Blast	cellular component
cytoskeletal part	Blast	cellular component
organelle part	Blast	cellular component
microtubule organizing center	Blast	cellular component
cytoplasmic part	Blast	cellular component

GO (Orthology)

6 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
protein kinase activity	Hs	molecular function
protein serine/threonine kinase activity	Hs	molecular function
binding	Hs	molecular function
ATP binding	Hs	molecular function
protein phosphorylation	Hs	biological process

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	219	4.07e-61
protein kinase activity	Hs	molecular function	219	4.07e-61
protein serine/threonine kinase activity	Hs	molecular function	219	4.07e-61
binding	Hs	molecular function	219	4.07e-61
protein binding	Hs	molecular function	160	1.13e-40
ATP binding	Hs	molecular function	219	4.07e-61
cytoplasm	Hs	cellular component	160	1.13e-40
cytosol	Hs	cellular component	160	1.13e-40
cilium	Hs	cellular component	160	1.13e-40
kinase activity	Hs	molecular function	160	1.13e-40
transferase activity	Hs	molecular function	160	1.13e-40
manganese ion binding	Hs	molecular function	160	1.13e-40
ciliary rootlet	Hs	cellular component	160	1.13e-40
ciliary transition zone	Hs	cellular component	160	1.13e-40
ciliary basal body	Hs	cellular component	160	1.13e-40
cell projection	Hs	cellular component	160	1.13e-40
metal ion binding	Hs	molecular function	160	1.13e-40
ciliary plasm	Hs	cellular component	160	1.13e-40

GO (InterProScan)