Aniseed - Gene card

Gene 'KH2012:KH.L147.13'

Gene Card

Best human hits

GJC1; GJC2; GJD2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00011292

Gene Model ID

KH2012:KH.L147.13

Location

KhL147:69509..73454

Transcript Models and Sequences

KH2012:KH.L147.13.v1.A.ND1-1

External Database Gene Card

External database links

No result

Collections

Gateway full ORF

1 result

cien208847

Plate: VES102_J17

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
Connexin_N_sf	Gene3D	Connexin, N-terminal domain superfamily
Connexin_N	SMART	Connexin, N-terminal
Connexin_CCC	SMART	Gap junction protein, cysteine-rich domain
Connexin_CS	ProSitePatterns	Connexin, conserved site
Connexin	PRINTS	Connexin
Connexin_N	Pfam	Connexin, N-terminal
Connexin	PANTHER	Connexin

GOSlim

16 results

GO Term	Annotation Origin	Type
endoplasmic reticulum membrane	Blast	cellular component
plasma membrane	Blast	cellular component
cell communication	Blast	biological process
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
cell junction	Blast	cellular component
neuronal cell body	Blast	cellular component
myelin sheath	Blast	cellular component
transmembrane transport	Blast	biological process
ion transport	Blast	biological process
plasma membrane part	Blast	cellular component
macromolecular complex	Blast	cellular component
cell projection part	Blast	cellular component
axon	Blast	cellular component
signaling	Blast	biological process
neuron projection	Blast	cellular component

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
ion channel activity	Hs	molecular function	139	2.38e-36
gap junction channel activity	Hs	molecular function	139	2.38e-36
endoplasmic reticulum membrane	Hs	cellular component	139	2.38e-36
plasma membrane	Hs	cellular component	139	2.38e-36
gap junction	Hs	cellular component	139	2.38e-36
connexin complex	Hs	cellular component	139	2.38e-36
intercalated disc	Hs	cellular component	139	2.38e-36
membrane	Hs	cellular component	139	2.38e-36
integral component of membrane	Hs	cellular component	139	2.38e-36
cell junction	Hs	cellular component	139	2.38e-36
paranode region of axon	Hs	cellular component	136	8.55e-35
neuronal cell body	Hs	cellular component	136	8.55e-35
perikaryon	Hs	cellular component	136	8.55e-35
myelin sheath	Hs	cellular component	136	8.55e-35
gap junction channel activity involved in SA node cell-atrial cardiac muscle cell electrical coupling	Hs	molecular function	139	2.38e-36
gap junction channel activity involved in AV node cell-bundle of His cell electrical coupling	Hs	molecular function	139	2.38e-36
gap junction channel activity involved in cell communication by electrical coupling	Hs	molecular function	136	8.55e-35
proximal neuron projection	Hs	cellular component	136	8.55e-35

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
connexin complex	PANTHER	cellular component	2.6E-108
cell communication	PANTHER	biological process	2.6E-108