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GENE CARD

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Gene Card

Best human hits

SET; SETSIP; TSPYL1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00010675

Gene Model ID

KH2012:KH.L11.6

Location

KhL11:36069..39411

Transcript Models and Sequences

  KH2012:KH.L11.6.v1.A.nonSL10-1
KH2012:KH.L11.6.v1.A.nonSL1-1
KH2012:KH.L11.6.v1.A.nonSL3-1
KH2012:KH.L11.6.v1.A.nonSL4-1
KH2012:KH.L11.6.v1.A.nonSL5-1
KH2012:KH.L11.6.v1.A.nonSL7-1
KH2012:KH.L11.6.v1.A.nonSL8-1
KH2012:KH.L11.6.v1.A.nonSL9-1
KH2012:KH.L11.6.v1.A.SL1-1
KH2012:KH.L11.6.v1.A.SL6-1
KH2012:KH.L11.6.v1.R.ND2-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000001625
NCBI Reference Sequence XM_018815063.1
Collections

Gateway full ORF

2 results

cien50360

Plate: VES78_P04

cien189201

Plate: VES99_F13

Gene collection 1 (N. Satoh)

1 result

cicl030c16

Plate: R1CiGC12o21

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
NAP-like_sf SUPERFAMILY NAP-like superfamily
NAP_family PANTHER Nucleosome assembly protein (NAP)
NAP_family Pfam Nucleosome assembly protein (NAP)

GOSlim

36 results

GO Term Annotation Origin Type
DNA binding Orthology molecular function
chromatin binding Blast molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
nucleolus Orthology cellular component
cytoplasm Orthology cellular component
endoplasmic reticulum Blast cellular component
cytosol Blast cellular component
DNA replication Orthology biological process
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
enzyme binding Orthology molecular function
cell differentiation Orthology biological process
macromolecular complex Blast cellular component
perinuclear region of cytoplasm Blast cellular component
cell cycle Orthology biological process
multicellular organism development Orthology biological process
spermatogenesis Orthology biological process
cell proliferation Orthology biological process
positive regulation of cell proliferation Orthology biological process
regulation of signal transduction Orthology biological process
organelle organization Orthology biological process
sequence-specific double-stranded DNA binding Orthology molecular function
developmental process Orthology biological process
reproductive process Orthology biological process
cellular component organization Orthology biological process
protein ubiquitination Orthology biological process
regulation of catalytic activity Orthology biological process
protein kinase activity Orthology molecular function
regulation of cellular metabolic process Orthology biological process
intracellular signal transduction Orthology biological process
positive regulation of signal transduction Orthology biological process
protein dephosphorylation Blast biological process
enzyme regulator activity Blast molecular function
intracellular non-membrane-bounded organelle Blast cellular component

GO (Orthology)

27 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
nucleosome assembly Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
enzyme binding Hs molecular function
cell differentiation Hs biological process
rDNA binding Hs molecular function
chromatin organization Hs biological process
cell cycle Hs biological process
multicellular organism development Hs biological process
spermatogenesis Hs biological process
sex differentiation Hs biological process
negative regulation of DNA replication Hs biological process
cell proliferation Hs biological process
positive regulation of cell proliferation Hs biological process
regulation of signal transduction Hs biological process
negative regulation of cell growth Hs biological process
positive regulation of protein ubiquitination Hs biological process
regulation of growth Hs biological process
negative regulation of cell cycle Hs biological process
regulation of protein kinase activity Hs biological process
positive regulation of protein kinase B signaling Hs biological process
cellular response to gamma radiation Hs biological process

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
DNA binding Hs molecular function 186 6.17e-56
chromatin binding Hs molecular function 174 6.98e-51
protein phosphatase inhibitor activity Hs molecular function 186 6.17e-56
protein binding Hs molecular function 186 6.17e-56
nucleus Hs cellular component 186 6.17e-56
nucleoplasm Hs cellular component 186 6.17e-56
nucleolus Hs cellular component 136 8.73e-36
cytoplasm Hs cellular component 186 6.17e-56
endoplasmic reticulum Hs cellular component 186 6.17e-56
lipid droplet Hs cellular component 186 6.17e-56
cytosol Hs cellular component 186 6.17e-56
protein phosphatase regulator activity Hs molecular function 186 6.17e-56
enzyme binding Hs molecular function 136 8.73e-36
macromolecular complex Hs cellular component 186 6.17e-56
histone binding Hs molecular function 186 6.17e-56
perinuclear region of cytoplasm Hs cellular component 186 6.17e-56

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleus PANTHER cellular component 2.3E-68
nucleosome assembly PANTHER biological process 2.3E-68

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