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Gene Card

Best human hits

MARCH2; MARCH5; MARCH8

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00009654

Gene Model ID

KH2012:KH.C9.137

Location

KhC9:5681944..5691604

Transcript Models and Sequences

  KH2012:KH.C9.137.v1.A.ND1-1
KH2012:KH.C9.137.v2.A.nonSL10-1
KH2012:KH.C9.137.v2.A.nonSL4-1
KH2012:KH.C9.137.v2.A.nonSL5-1
KH2012:KH.C9.137.v2.A.nonSL6-1
KH2012:KH.C9.137.v2.A.nonSL7-1
KH2012:KH.C9.137.v2.A.nonSL8-1
KH2012:KH.C9.137.v2.A.nonSL9-1
KH2012:KH.C9.137.v2.R.ND2-1
KH2012:KH.C9.137.v3.A.SL3-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000006502
Collections

Gateway full ORF

2 results

cien48120

Plate: VES77_K21

cien193251

Plate: VES100_L06

Gene collection 1 (N. Satoh)

1 result

cieg048p02

Plate: R1CiGC23m08

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_RING-CH ProSiteProfiles Zinc finger, RING-CH-type
Znf_RING-CH Pfam Zinc finger, RING-CH-type
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Znf_RING-CH SMART Zinc finger, RING-CH-type

GOSlim

21 results

GO Term Annotation Origin Type
ubiquitin-protein transferase activity Blast molecular function
protein binding Blast molecular function
mitochondrion Blast cellular component
lysosome Blast cellular component
lysosomal membrane Blast cellular component
endosome Blast cellular component
endoplasmic reticulum Blast cellular component
endoplasmic reticulum membrane Blast cellular component
zinc ion binding Blast molecular function
membrane Blast cellular component
integral component of membrane Blast cellular component
transferase activity Blast molecular function
cytoplasmic vesicle Blast cellular component
metal ion binding Blast molecular function
whole membrane Blast cellular component
mitochondrial membrane Blast cellular component
bounding membrane of organelle Blast cellular component
intracellular organelle part Blast cellular component
organelle membrane Blast cellular component
early endosome Blast cellular component
enzyme binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
ubiquitin-protein transferase activity Hs molecular function 43.1 2.51e-04
protein binding Hs molecular function 43.1 2.51e-04
mitochondrion Hs cellular component 43.1 2.51e-04
mitochondrial outer membrane Hs cellular component 43.1 2.51e-04
lysosome Hs cellular component 42.0 0.001
lysosomal membrane Hs cellular component 42.0 0.001
endosome Hs cellular component 42.0 0.001
endoplasmic reticulum Hs cellular component 43.1 2.51e-04
endoplasmic reticulum membrane Hs cellular component 43.1 2.51e-04
zinc ion binding Hs molecular function 43.1 2.51e-04
endosome membrane Hs cellular component 41.2 7.66e-04
membrane Hs cellular component 43.1 2.51e-04
integral component of membrane Hs cellular component 43.1 2.51e-04
transferase activity Hs molecular function 43.1 2.51e-04
cytoplasmic vesicle membrane Hs cellular component 42.0 0.001
cytoplasmic vesicle Hs cellular component 42.0 0.001
early endosome membrane Hs cellular component 42.0 0.001
metal ion binding Hs molecular function 43.1 2.51e-04
GTPase binding Hs molecular function 43.1 2.51e-04

GO (InterProScan)

1 result

GO Term Analysis Type e-value
zinc ion binding Pfam molecular function 7.5E-11

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