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GENE CARD

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  1. Gene 'KH2012:KH.C9.112'

Gene Card

Best human hits

KIAA1217; SRCIN1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00009627

Gene Model ID

KH2012:KH.C9.112

Location

KhC9:4842044..4887650

Transcript Models and Sequences

  KH2012:KH.C9.112.v1.A.SL1-1
KH2012:KH.C9.112.v1.A.SL4-1
KH2012:KH.C9.112.v2.A.SL3-1
KH2012:KH.C9.112.v2.A.SL5-1
KH2012:KH.C9.112.v3.A.SL2-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000009440
ENSEMBL ENSCING00000012969
ENSEMBL ENSCING00000023555
Collections

Gateway full ORF

1 result

cien43955

Plate: VES77_E07

Gene collection 1 (N. Satoh)

1 result

cilv026h04

Plate: R1CiGC27e04

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
AIP3-like_C Pfam Actin interacting protein 3-like, C-terminal

GOSlim

19 results

GO Term Annotation Origin Type
protein binding Blast molecular function
cytoplasm Blast cellular component
cytoskeleton Blast cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
protein kinase binding Blast molecular function
lamellipodium Blast cellular component
cell junction Blast cellular component
axon Blast cellular component
cell projection Blast cellular component
neuron projection Blast cellular component
neuronal cell body Blast cellular component
synapse Blast cellular component
postsynaptic membrane Blast cellular component
organelle Blast cellular component
postsynapse Blast cellular component
neuron part Blast cellular component
plasma membrane region Blast cellular component
cytoskeletal part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
protein binding Hs molecular function 94.7 2.35e-19
cytoplasm Hs cellular component 136 5.96e-32
cytoskeleton Hs cellular component 94.7 2.35e-19
plasma membrane Hs cellular component 94.7 2.35e-19
postsynaptic density Hs cellular component 94.7 2.35e-19
actin cytoskeleton Hs cellular component 94.7 2.35e-19
membrane Hs cellular component 94.7 2.35e-19
protein kinase binding Hs molecular function 94.7 2.35e-19
protein domain specific binding Hs molecular function 94.7 2.35e-19
lamellipodium Hs cellular component 94.7 2.35e-19
cell junction Hs cellular component 94.7 2.35e-19
filopodium Hs cellular component 94.7 2.35e-19
axon Hs cellular component 94.7 2.35e-19
dendrite Hs cellular component 94.7 2.35e-19
cell projection Hs cellular component 94.7 2.35e-19
neuron projection Hs cellular component 94.7 2.35e-19
neuronal cell body Hs cellular component 94.7 2.35e-19
synapse Hs cellular component 94.7 2.35e-19
postsynaptic membrane Hs cellular component 94.7 2.35e-19

GO (InterProScan)

No result

GO Term Analysis Type e-value

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