Aniseed - Gene card

Gene 'KH2012:KH.C8.316'

Gene Card

Best human hits

PRICKLE1; PRICKLE2; PRICKLE3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00008938

Gene Model ID

KH2012:KH.C8.316

Location

KhC8:1319622..1361760

Transcript Models and Sequences

KH2012:KH.C8.316.v1.A.SL1-1
KH2012:KH.C8.316.v1.A.SL3-1
KH2012:KH.C8.316.v2.A.nonSL4-1
KH2012:KH.C8.316.v2.R.ND2-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000006721
NCBI Reference Sequence	NM_001032428.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cilv038c05

Plate: R1CiGC28i21

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

1 results

Prickle Like 10773/10946 REG00000216 [ inactive_region ]

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term	Analysis	Definition
LIM1_prickle	CDD	LIM1 prickle
Znf_LIM	ProSiteProfiles	Zinc finger, LIM-type
LIM2_prickle	CDD	LIM2 prickle
PET_prickle	CDD	PET prickle
Znf_LIM	SMART	Zinc finger, LIM-type
Znf_LIM	Pfam	Zinc finger, LIM-type
LIM3_prickle	CDD	LIM3 prickle
PET_domain	ProSiteProfiles	PET domain
Znf_LIM	ProSitePatterns	Zinc finger, LIM-type
PET_domain	Pfam	PET domain

GOSlim

26 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
cytoplasm	Orthology	cellular component
centrosome	Orthology	cellular component
cytosol	Orthology	cellular component
plasma membrane	Orthology	cellular component
multicellular organism development	Orthology	biological process
zinc ion binding	Orthology	molecular function
membrane	Orthology	cellular component
cell projection organization	Orthology	biological process
nuclear membrane	Orthology	cellular component
negative regulation of transcription, DNA-templated	Orthology	biological process
metal ion binding	Orthology	molecular function
negative regulation of canonical Wnt signaling pathway	Orthology	biological process
anatomical structure formation involved in morphogenesis	Orthology	biological process
nervous system development	Orthology	biological process
intracellular protein transport	Orthology	biological process
establishment of protein localization to organelle	Orthology	biological process
protein ubiquitination	Orthology	biological process
proteolysis	Orthology	biological process
blood vessel development	Orthology	biological process
cell surface receptor signaling pathway	Orthology	biological process
cell-cell signaling	Orthology	biological process
anatomical structure morphogenesis	Orthology	biological process
animal organ development	Orthology	biological process
heart development	Orthology	biological process

GO (Orthology)

21 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
neural tube closure	Hs	biological process
protein binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
centrosome	Hs	cellular component
cytosol	Hs	cellular component
plasma membrane	Hs	cellular component
protein import into nucleus	Hs	biological process
multicellular organism development	Hs	biological process
zinc ion binding	Hs	molecular function
membrane	Hs	cellular component
cell projection organization	Hs	biological process
positive regulation of protein ubiquitination	Hs	biological process
nuclear membrane	Hs	cellular component
positive regulation of proteasomal ubiquitin-dependent protein catabolic process	Hs	biological process
aorta development	Hs	biological process
negative regulation of transcription, DNA-templated	Hs	biological process
metal ion binding	Hs	molecular function
Wnt signaling pathway, planar cell polarity pathway	Hs	biological process
coronary vasculature development	Hs	biological process
negative regulation of canonical Wnt signaling pathway	Hs	biological process

GO (Blast)