Gene Card
Best human hits
TSEN2
Unique Gene ID
Cirobu.g00008724
Gene Model ID
KH2012:KH.C8.12
Location
KhC8:1438432..1440395
External database links
1 result
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000013311 |
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
6 results
| IPR Term | Analysis | Definition |
|---|---|---|
| tRNA_endonuc-like_dom_sf | Gene3D | tRNA endonuclease-like domain superfamily |
| tRNA_intron_Endonuc_N | Pfam | tRNA intron endonuclease, N-terminal |
| tRNA_splic_SEN2 | PIRSF | tRNA-splicing endonuclease, SEN2 subunit |
| tRNA_splic | PANTHER | tRNA-splicing endonuclease |
| tRNA_intron_Endo_cat-like_sf | SUPERFAMILY | tRNA intron endonuclease, catalytic domain-like superfamily |
| tRNA_intron_Endonuc_cat-like | Pfam | tRNA intron endonuclease, catalytic domain-like |
GOSlim
15 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleic acid binding | Orthology | molecular function |
| protein binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| nucleoplasm | Orthology | cellular component |
| nucleolus | Orthology | cellular component |
| centrosome | Orthology | cellular component |
| cytosol | Orthology | cellular component |
| mRNA processing | Orthology | biological process |
| RNA metabolic process | Orthology | biological process |
| hydrolase activity | Orthology | molecular function |
| nuclear part | Orthology | cellular component |
| macromolecular complex | Orthology | cellular component |
| RNA splicing | Orthology | biological process |
| RNA processing | Orthology | biological process |
| catalytic activity | Orthology | molecular function |
GO (Orthology)
19 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| tRNA-intron endonuclease activity | Hs | molecular function |
| tRNA-intron endonuclease complex | Hs | cellular component |
| tRNA-type intron splice site recognition and cleavage | Hs | biological process |
| nucleic acid binding | Hs | molecular function |
| nuclease activity | Hs | molecular function |
| endonuclease activity | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| nucleolus | Hs | cellular component |
| centrosome | Hs | cellular component |
| cytosol | Hs | cellular component |
| tRNA splicing, via endonucleolytic cleavage and ligation | Hs | biological process |
| mRNA processing | Hs | biological process |
| tRNA processing | Hs | biological process |
| lyase activity | Hs | molecular function |
| nucleic acid phosphodiester bond hydrolysis | Hs | biological process |
| RNA phosphodiester bond hydrolysis | Hs | biological process |
| RNA phosphodiester bond hydrolysis, endonucleolytic | Hs | biological process |
GO (Blast)
12 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| tRNA-intron endonuclease activity | Hs | molecular function | 159 | 3.40e-45 |
| tRNA-intron endonuclease complex | Hs | cellular component | 159 | 3.40e-45 |
| nucleic acid binding | Hs | molecular function | 159 | 3.40e-45 |
| nuclease activity | Hs | molecular function | 159 | 3.40e-45 |
| endonuclease activity | Hs | molecular function | 159 | 3.40e-45 |
| protein binding | Hs | molecular function | 159 | 3.40e-45 |
| nucleus | Hs | cellular component | 159 | 3.40e-45 |
| nucleoplasm | Hs | cellular component | 159 | 3.40e-45 |
| nucleolus | Hs | cellular component | 159 | 3.40e-45 |
| centrosome | Hs | cellular component | 159 | 3.40e-45 |
| cytosol | Hs | cellular component | 159 | 3.40e-45 |
| lyase activity | Hs | molecular function | 159 | 3.40e-45 |
GO (InterProScan)
5 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| tRNA-intron endonuclease activity | PANTHER | molecular function | 4.6E-69 |
| tRNA-intron endonuclease complex | PIRSF | cellular component | 3.4E-58 |
| nucleic acid binding | Gene3D | molecular function | 2.0E-26 |
| nuclease activity | Gene3D | molecular function | 2.0E-26 |
| tRNA splicing, via endonucleolytic cleavage and ligation | PANTHER | biological process | 4.6E-69 |
