Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000003145
NCBI Reference Sequence	NM_001032518.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

citb2a12

Plate: R1CiGC28n17

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Small_GTPase_Rho	ProSiteProfiles	Small GTPase superfamily, Rho type
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
Small_GTPase	Pfam	Small GTPase superfamily
Small_GTP-bd_dom	TIGRFAM	Small GTP-binding protein domain

GOSlim

44 results

GO Term	Annotation Origin	Type
nucleotide binding	Blast	molecular function
GTPase activity	Blast	molecular function
signal transducer activity	Blast	molecular function
protein binding	Blast	molecular function
GTP binding	Blast	molecular function
intracellular	Blast	cellular component
nucleus	Blast	cellular component
cytoplasm	Blast	cellular component
mitochondrion	Blast	cellular component
endosome	Blast	cellular component
early endosome	Blast	cellular component
endoplasmic reticulum membrane	Blast	cellular component
cytosol	Blast	cellular component
cytoskeleton	Blast	cellular component
plasma membrane	Blast	cellular component
focal adhesion	Blast	cellular component
small GTPase mediated signal transduction	InterProScan	biological process
membrane	Blast	cellular component
lamellipodium	Blast	cellular component
cell junction	Blast	cellular component
axon	Blast	cellular component
midbody	Blast	cellular component
vesicle	Blast	cellular component
cell projection	Blast	cellular component
extracellular exosome	Blast	cellular component
cell periphery	Blast	cellular component
cytoplasmic part	Blast	cellular component
intracellular organelle part	Blast	cellular component
whole membrane	Blast	cellular component
bounding membrane of organelle	Blast	cellular component
cytoskeletal protein binding	Blast	molecular function
anion binding	Blast	molecular function
guanyl ribonucleotide binding	Blast	molecular function
purine ribonucleoside binding	Blast	molecular function
cytoplasmic vesicle	Blast	cellular component
endomembrane system	Blast	cellular component
intracellular part	Blast	cellular component
plasma membrane part	Blast	cellular component
plasma membrane region	Blast	cellular component
neuron projection	Blast	cellular component
cluster of actin-based cell projections	Blast	cellular component
cell projection membrane	Blast	cellular component
cell leading edge	Blast	cellular component
postsynapse	Blast	cellular component

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

41 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	350	3.60e-125
GTPase activity	Hs	molecular function	350	3.60e-125
signal transducer activity	Hs	molecular function	251	4.98e-86
protein binding	Hs	molecular function	350	3.60e-125
GTP binding	Hs	molecular function	350	3.60e-125
intracellular	Hs	cellular component	350	3.60e-125
nucleus	Hs	cellular component	350	3.60e-125
cytoplasm	Hs	cellular component	350	3.60e-125
mitochondrion	Hs	cellular component	350	3.60e-125
endosome	Hs	cellular component	350	3.60e-125
early endosome	Hs	cellular component	322	5.52e-114
late endosome	Hs	cellular component	322	5.52e-114
endoplasmic reticulum membrane	Hs	cellular component	350	3.60e-125
cytosol	Hs	cellular component	350	3.60e-125
cytoskeleton	Hs	cellular component	350	3.60e-125
plasma membrane	Hs	cellular component	350	3.60e-125
focal adhesion	Hs	cellular component	350	3.60e-125
cell cortex	Hs	cellular component	350	3.60e-125
endosome membrane	Hs	cellular component	322	5.52e-114
membrane	Hs	cellular component	350	3.60e-125
myosin binding	Hs	molecular function	350	3.60e-125
GDP binding	Hs	molecular function	350	3.60e-125
protein domain specific binding	Hs	molecular function	350	3.60e-125
lamellipodium	Hs	cellular component	350	3.60e-125
cell junction	Hs	cellular component	350	3.60e-125
axon	Hs	cellular component	350	3.60e-125
midbody	Hs	cellular component	350	3.60e-125
secretory granule membrane	Hs	cellular component	350	3.60e-125
extrinsic component of cytoplasmic side of plasma membrane	Hs	cellular component	350	3.60e-125
late endosome membrane	Hs	cellular component	322	5.52e-114
vesicle	Hs	cellular component	350	3.60e-125
cleavage furrow	Hs	cellular component	350	3.60e-125
stereocilium	Hs	cellular component	251	4.98e-86
ruffle membrane	Hs	cellular component	350	3.60e-125
cell projection	Hs	cellular component	350	3.60e-125
dendritic spine	Hs	cellular component	350	3.60e-125
apical junction complex	Hs	cellular component	350	3.60e-125
Rho GDP-dissociation inhibitor binding	Hs	molecular function	350	3.60e-125
extracellular exosome	Hs	cellular component	350	3.60e-125
cell periphery	Hs	cellular component	350	3.60e-125
ficolin-1-rich granule membrane	Hs	cellular component	350	3.60e-125

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
GTPase activity	Pfam	molecular function	3.7E-57
GTP binding	Pfam	molecular function	3.7E-57
intracellular	ProSiteProfiles	cellular component	19.46
small GTPase mediated signal transduction	ProSiteProfiles	biological process	19.46

Gene Card

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