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Gene Card

Best human hits

FBXO45; SPSB1; SPSB4

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007962

Gene Model ID

KH2012:KH.C7.141

Location

KhC7:855212..858173

Transcript Models and Sequences

  KH2012:KH.C7.141.v1.A.SL1-1
KH2012:KH.C7.141.v1.A.SL2-1
KH2012:KH.C7.141.v2.A.SL3-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000006835
Collections

Gateway full ORF

2 results

cien116809

Plate: VES88_A15

cien161700

Plate: VES95_D08

Gene collection 1 (N. Satoh)

1 result

cicl052k01

Plate: R1CiGC14k11

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
F-box-like_dom_sf SUPERFAMILY F-box-like domain superfamily
B30.2/SPRY ProSiteProfiles B30.2/SPRY domain
F-box_dom ProSiteProfiles F-box domain
SPRY_dom SMART SPRY domain
ConA-like_dom_sf SUPERFAMILY Concanavalin A-like lectin/glucanase domain superfamily
SPRY_FBXO45 CDD Fbxo45, SPRY domain
F-box_dom Pfam F-box domain
SPRY_dom Pfam SPRY domain
F-box_dom SMART F-box domain

GOSlim

22 results

GO Term Annotation Origin Type
ubiquitin-protein transferase activity Blast molecular function
protein binding Orthology molecular function
cytoplasm Blast cellular component
cytosol Blast cellular component
plasma membrane Orthology cellular component
cellular response to DNA damage stimulus Orthology biological process
multicellular organism development Orthology biological process
nervous system development Orthology biological process
membrane Orthology cellular component
protein ubiquitination Orthology biological process
cell junction Orthology cellular component
synapse Orthology cellular component
postsynaptic membrane Orthology cellular component
cell migration Orthology biological process
generation of neurons Orthology biological process
proteolysis Orthology biological process
organelle Orthology cellular component
postsynapse Orthology cellular component
neuron part Orthology cellular component
axonogenesis Orthology biological process
brain development Orthology biological process
synaptic membrane Orthology cellular component

GO (Orthology)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
neuron migration Hs biological process
protein binding Hs molecular function
plasma membrane Hs cellular component
ubiquitin-dependent protein catabolic process Hs biological process
cellular response to DNA damage stimulus Hs biological process
multicellular organism development Hs biological process
nervous system development Hs biological process
postsynaptic density Hs cellular component
membrane Hs cellular component
protein ubiquitination Hs biological process
anterior commissure morphogenesis Hs biological process
cell junction Hs cellular component
presynaptic membrane Hs cellular component
proteasome-mediated ubiquitin-dependent protein catabolic process Hs biological process
synapse Hs cellular component
postsynaptic membrane Hs cellular component
synapse assembly involved in innervation Hs biological process

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
ubiquitin-protein transferase activity Hs molecular function 153 2.35e-45
protein binding Hs molecular function 347 2.71e-121
cytoplasm Hs cellular component 153 2.35e-45
cytosol Hs cellular component 153 2.35e-45
plasma membrane Hs cellular component 347 2.71e-121
postsynaptic density Hs cellular component 347 2.71e-121
membrane Hs cellular component 347 2.71e-121
cell junction Hs cellular component 347 2.71e-121
presynaptic membrane Hs cellular component 347 2.71e-121
synapse Hs cellular component 347 2.71e-121
postsynaptic membrane Hs cellular component 347 2.71e-121

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Pfam molecular function 3.1E-16

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