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GENE CARD

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  1. Gene 'KH2012:KH.C6.67'

Gene Card

Best human hits

TK1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007881

Gene Model ID

KH2012:KH.C6.67

Location

KhC6:2303879..2305559

Transcript Models and Sequences

  KH2012:KH.C6.67.v1.A.ND4-1
KH2012:KH.C6.67.v1.A.nonSL5-1
KH2012:KH.C6.67.v1.A.SL1-1
KH2012:KH.C6.67.v1.A.SL2-1
KH2012:KH.C6.67.v1.A.SL3-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000021067
NCBI Reference Sequence XM_002127497.4
Collections

Gateway full ORF

2 results

cima874294

Plate: VES67_N11

cien208354

Plate: VES102_H15

Gene collection 1 (N. Satoh)

1 result

cicl061f11

Plate: R1CiGC15g16

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Thymidine_kinase Pfam Thymidine kinase
Thymidine_kinase_CS ProSitePatterns Thymidine kinase, conserved site
Thymidine_kinase PIRSF Thymidine kinase
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Thymidine_kinase PANTHER Thymidine kinase

GOSlim

15 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
protein binding Orthology molecular function
ATP binding Orthology molecular function
cytoplasm Orthology cellular component
cytosol Orthology cellular component
nucleobase-containing compound metabolic process Orthology biological process
DNA metabolic process Orthology biological process
zinc ion binding Orthology molecular function
kinase activity Orthology molecular function
phosphorylation Orthology biological process
transferase activity Orthology molecular function
identical protein binding Orthology molecular function
metal ion binding Orthology molecular function
phosphate-containing compound metabolic process Orthology biological process
protein homooligomerization Orthology biological process

GO (Orthology)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleotide binding Hs molecular function
thymidine kinase activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
cytoplasm Hs cellular component
cytosol Hs cellular component
nucleobase-containing compound metabolic process Hs biological process
DNA metabolic process Hs biological process
zinc ion binding Hs molecular function
deoxyribonucleoside monophosphate biosynthetic process Hs biological process
nucleotide biosynthetic process Hs biological process
kinase activity Hs molecular function
phosphorylation Hs biological process
transferase activity Hs molecular function
nucleoside kinase activity Hs molecular function
identical protein binding Hs molecular function
pyrimidine nucleoside salvage Hs biological process
metal ion binding Hs molecular function
protein homotetramerization Hs biological process
DNA biosynthetic process Hs biological process

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 233 2.54e-77
thymidine kinase activity Hs molecular function 233 2.54e-77
protein binding Hs molecular function 233 2.54e-77
ATP binding Hs molecular function 233 2.54e-77
cytoplasm Hs cellular component 233 2.54e-77
cytosol Hs cellular component 233 2.54e-77
zinc ion binding Hs molecular function 233 2.54e-77
kinase activity Hs molecular function 233 2.54e-77
transferase activity Hs molecular function 233 2.54e-77
nucleoside kinase activity Hs molecular function 233 2.54e-77
identical protein binding Hs molecular function 233 2.54e-77
metal ion binding Hs molecular function 233 2.54e-77

GO (InterProScan)

2 results

GO Term Analysis Type e-value
thymidine kinase activity PANTHER molecular function 1.7E-86
ATP binding PANTHER molecular function 1.7E-86

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