Aniseed - Gene card

GENE CARD

Submit your Data

>
Gene 'KH2012:KH.C4.19' >

Gene Card

Best human hits

AP000311.1; ATP5PO

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007659

Gene Model ID

KH2012:KH.C6.140

Location

KhC6:2341433..2343422

Transcript Models and Sequences

KH2012:KH.C6.140.v1.A.nonSL10-1
KH2012:KH.C6.140.v1.A.nonSL12-1
KH2012:KH.C6.140.v1.A.nonSL3-1
KH2012:KH.C6.140.v1.A.nonSL4-1
KH2012:KH.C6.140.v1.A.nonSL5-1
KH2012:KH.C6.140.v1.A.nonSL6-1
KH2012:KH.C6.140.v1.A.nonSL7-1
KH2012:KH.C6.140.v1.A.nonSL9-1
KH2012:KH.C6.140.v1.A.SL13-1
KH2012:KH.C6.140.v1.A.SL14-1
KH2012:KH.C6.140.v1.A.SL2-1
KH2012:KH.C6.140.v1.A.SL8-1
KH2012:KH.C6.140.v1.R.ND1-1
KH2012:KH.C6.140.v2.A.nonSL10-1
KH2012:KH.C6.140.v2.A.nonSL12-1
KH2012:KH.C6.140.v2.A.nonSL3-1
KH2012:KH.C6.140.v2.A.nonSL4-1
KH2012:KH.C6.140.v2.A.nonSL5-1
KH2012:KH.C6.140.v2.A.nonSL6-1
KH2012:KH.C6.140.v2.A.nonSL7-1
KH2012:KH.C6.140.v2.A.nonSL9-1
KH2012:KH.C6.140.v2.A.SL13-1
KH2012:KH.C6.140.v2.A.SL14-1
KH2012:KH.C6.140.v2.A.SL2-1
KH2012:KH.C6.140.v2.A.SL8-1
KH2012:KH.C6.140.v2.R.ND1-1
KH2012:KH.C6.140.v3.A.SL11-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000005746
NCBI Reference Sequence	XM_002127181.4
NCBI Reference Sequence	XM_002127201.3

Collections

Gateway full ORF

2 results

cima893637

Plate: VES71_C08

cien114362

Plate: VES88_M04

Gene collection 1 (N. Satoh)

2 results

cicl007b13

Plate: R1CiGC09e19

cicl016o04

Plate: R1CiGC10o04

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
ATPase_OSCP/d_CS	ProSitePatterns	ATPase, OSCP/delta subunit, conserved site
ATPase_OSCP/dsu	PANTHER	ATPase, OSCP/delta subunit
ATPase_OSCP/dsu	Hamap	ATPase, OSCP/delta subunit
ATPase_OSCP/dsu	TIGRFAM	ATPase, OSCP/delta subunit
ATP_synth_OSCP/delta_N_sf	Gene3D	F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily
ATPase_OSCP/dsu	Pfam	ATPase, OSCP/delta subunit
ATP_synth_OSCP/delta_N_sf	SUPERFAMILY	F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily
ATPase_OSCP/dsu	PRINTS	ATPase, OSCP/delta subunit

GOSlim

20 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
mitochondrion	Orthology	cellular component
mitochondrial inner membrane	Orthology	cellular component
plasma membrane	Orthology	cellular component
ion transport	Orthology	biological process
membrane	Orthology	cellular component
extracellular exosome	Orthology	cellular component
membrane part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
phosphate-containing compound metabolic process	Orthology	biological process
binding	Orthology	molecular function
transmembrane transport	Orthology	biological process
monovalent inorganic cation transport	Orthology	biological process
nucleoside-triphosphatase activity	Orthology	molecular function
membrane organization	Orthology	biological process
organelle organization	Orthology	biological process
phosphorylation	Orthology	biological process
intracellular transport	Orthology	biological process
cation transport	Orthology	biological process

GO (Orthology)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
transporter activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
mitochondrion	Hs	cellular component
mitochondrial inner membrane	Hs	cellular component
mitochondrial proton-transporting ATP synthase complex	Hs	cellular component
plasma membrane	Hs	cellular component
ATP biosynthetic process	Hs	biological process
ion transport	Hs	biological process
drug binding	Hs	molecular function
ATP synthesis coupled proton transport	Hs	biological process
membrane	Hs	cellular component
ATPase activity	Hs	molecular function
transmembrane transporter activity	Hs	molecular function
cristae formation	Hs	biological process
mitochondrial ATP synthesis coupled proton transport	Hs	biological process
proton-transporting ATP synthase activity, rotational mechanism	Hs	molecular function
extracellular exosome	Hs	cellular component
ATP hydrolysis coupled cation transmembrane transport	Hs	biological process
hydrogen ion transmembrane transport	Hs	biological process

GO (Blast)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
transporter activity	Hs	molecular function	139	2.37e-41
protein binding	Hs	molecular function	139	2.37e-41
nucleus	Hs	cellular component	139	2.37e-41
mitochondrion	Hs	cellular component	139	2.37e-41
mitochondrial inner membrane	Hs	cellular component	139	2.37e-41
mitochondrial proton-transporting ATP synthase complex	Hs	cellular component	139	2.37e-41
plasma membrane	Hs	cellular component	139	2.37e-41
drug binding	Hs	molecular function	139	2.37e-41
membrane	Hs	cellular component	139	2.37e-41
ATPase activity	Hs	molecular function	139	2.37e-41
transmembrane transporter activity	Hs	molecular function	139	2.37e-41
proton-transporting ATP synthase activity, rotational mechanism	Hs	molecular function	139	2.37e-41
extracellular exosome	Hs	cellular component	139	2.37e-41

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
ATP synthesis coupled proton transport	PANTHER	biological process	2.8E-60
membrane	ProSitePatterns	cellular component
proton-transporting ATP synthase activity, rotational mechanism	PANTHER	molecular function	2.8E-60

Back to Top