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GENE CARD

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  1. Gene 'KH2012:KH.C5.583'

Gene Card

Best human hits

AC009119.2; MLYCD

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007483

Gene Model ID

KH2012:KH.C5.583

Location

KhC5:1916895..1918919

Transcript Models and Sequences

  KH2012:KH.C5.583.v1.A.ND1-1
KH2012:KH.C5.583.v1.A.SL2-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000021867
NCBI Reference Sequence XM_002128600.3
Collections

Gateway full ORF

2 results

cien107213

Plate: VES87_M01

cien212138

Plate: VES103_C05

Gene collection 1 (N. Satoh)

1 result

cieg001l03

Plate: R1CiGC15h19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Malonyl_CoA_deC_C Pfam Malonyl-CoA decarboxylase, C-terminal
MCD_N Pfam Malonyl-CoA decarboxylase, N-terminal
MCD_N_sf Gene3D Malonyl-CoA decarboxylase, N-terminal domain superfamily

GOSlim

18 results

GO Term Annotation Origin Type
receptor binding Orthology molecular function
cytoplasm Orthology cellular component
mitochondrion Orthology cellular component
mitochondrial matrix Orthology cellular component
peroxisome Orthology cellular component
identical protein binding Orthology molecular function
response to stress Orthology biological process
intracellular organelle part Orthology cellular component
intracellular organelle lumen Orthology cellular component
phosphate-containing compound metabolic process Orthology biological process
amide biosynthetic process Orthology biological process
organic substance metabolic process Orthology biological process
cellular metabolic process Orthology biological process
cellular biosynthetic process Orthology biological process
nucleobase-containing compound metabolic process Orthology biological process
regulation of cellular metabolic process Orthology biological process
catalytic activity Orthology molecular function
oxidation-reduction process Orthology biological process

GO (Orthology)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
response to ischemia Hs biological process
receptor binding Hs molecular function
cytoplasm Hs cellular component
mitochondrion Hs cellular component
mitochondrial matrix Hs cellular component
peroxisome Hs cellular component
peroxisomal matrix Hs cellular component
acetyl-CoA biosynthetic process Hs biological process
lipid metabolic process Hs biological process
fatty acid metabolic process Hs biological process
fatty acid biosynthetic process Hs biological process
acyl-CoA metabolic process Hs biological process
regulation of glucose metabolic process Hs biological process
lyase activity Hs molecular function
carboxy-lyase activity Hs molecular function
identical protein binding Hs molecular function
positive regulation of fatty acid oxidation Hs biological process
malonyl-CoA decarboxylase activity Hs molecular function

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
receptor binding Hs molecular function 319 5.44e-104
cytoplasm Hs cellular component 319 5.44e-104
mitochondrion Hs cellular component 319 5.44e-104
mitochondrial matrix Hs cellular component 319 5.44e-104
peroxisome Hs cellular component 319 5.44e-104
peroxisomal matrix Hs cellular component 319 5.44e-104
lyase activity Hs molecular function 319 5.44e-104
carboxy-lyase activity Hs molecular function 319 5.44e-104
identical protein binding Hs molecular function 319 5.44e-104
malonyl-CoA decarboxylase activity Hs molecular function 319 5.44e-104

GO (InterProScan)

2 results

GO Term Analysis Type e-value
fatty acid biosynthetic process Pfam biological process 1.3E-95
malonyl-CoA decarboxylase activity Pfam molecular function 1.3E-95

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