Aniseed - Gene card

Gene 'KH2012:KH.C5.530'

Gene Card

Best human hits

CDC6; ORC1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007425

Gene Model ID

KH2012:KH.C5.530

Location

KhC5:1596532..1606950

Transcript Models and Sequences

KH2012:KH.C5.530.v1.A.ND1-1

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000023277

Collections

Gene collection 1 (N. Satoh)

2 results

cicl060i07

Plate: R1CiGC15o17

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
ORC1	PANTHER	Origin recognition complex, subunit 1
AAA+_ATPase	SMART	AAA+ ATPase domain
ATPase_AAA_core	Pfam	ATPase, AAA-type, core
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
BAH_dom	ProSiteProfiles	Bromo adjacent homology (BAH) domain

GOSlim

20 results

GO Term	Annotation Origin	Type
G1/S transition of mitotic cell cycle	Orthology	biological process
nucleotide binding	Orthology	molecular function
DNA binding	Orthology	molecular function
chromatin binding	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
nucleolus	Orthology	cellular component
cytoplasm	Blast	cellular component
cytosol	Orthology	cellular component
plasma membrane	Orthology	cellular component
DNA replication	Orthology	biological process
kinase binding	Blast	molecular function
intracellular non-membrane-bounded organelle	Orthology	cellular component
nuclear lumen	Orthology	cellular component
intracellular organelle part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
cytoskeletal part	Blast	cellular component
microtubule cytoskeleton	Blast	cellular component

GO (Orthology)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
G1/S transition of mitotic cell cycle	Hs	biological process
nucleotide binding	Hs	molecular function
nuclear chromosome, telomeric region	Hs	cellular component
origin recognition complex	Hs	cellular component
DNA binding	Hs	molecular function
chromatin binding	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
nuclear origin of replication recognition complex	Hs	cellular component
nucleolus	Hs	cellular component
cytosol	Hs	cellular component
plasma membrane	Hs	cellular component
DNA replication	Hs	biological process
DNA replication initiation	Hs	biological process

GO (Blast)

17 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	388	3.76e-124
nuclear chromosome, telomeric region	Hs	cellular component	388	3.76e-124
origin recognition complex	Hs	cellular component	388	3.76e-124
spindle pole	Hs	cellular component	157	3.45e-41
DNA binding	Hs	molecular function	388	3.76e-124
chromatin binding	Hs	molecular function	388	3.76e-124
protein binding	Hs	molecular function	388	3.76e-124
ATP binding	Hs	molecular function	388	3.76e-124
nucleus	Hs	cellular component	388	3.76e-124
nucleoplasm	Hs	cellular component	388	3.76e-124
nuclear origin of replication recognition complex	Hs	cellular component	388	3.76e-124
nucleolus	Hs	cellular component	388	3.76e-124
cytoplasm	Hs	cellular component	157	3.45e-41
cytosol	Hs	cellular component	388	3.76e-124
plasma membrane	Hs	cellular component	388	3.76e-124
kinase binding	Hs	molecular function	157	3.45e-41
spindle midzone	Hs	cellular component	157	3.45e-41

GO (InterProScan)