Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000021962
NCBI Reference Sequence	NM_001078454.1

Collections

Gene collection 1 (N. Satoh)

1 result

ciad003d11

Plate: R1CiGC01a06

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Znf_C2H2_type	ProSitePatterns	Zinc finger C2H2-type
Znf_C2H2_type	ProSiteProfiles	Zinc finger C2H2-type
Znf_C2H2_sf	SUPERFAMILY	Zinc finger C2H2 superfamily
Znf_C2H2_type	SMART	Zinc finger C2H2-type

GOSlim

36 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Blast	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Orthology	molecular function
nucleic acid binding	Orthology	molecular function
DNA binding	Orthology	molecular function
chromatin binding	Blast	molecular function
transcription factor activity, sequence-specific DNA binding	Blast	molecular function
protein binding	Blast	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Blast	cellular component
nucleolus	Blast	cellular component
cytoplasm	Blast	cellular component
cytosol	Blast	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
transcription factor binding	Blast	molecular function
zinc ion binding	Blast	molecular function
membrane	Blast	cellular component
nuclear speck	Blast	cellular component
cell projection	Blast	cellular component
sequence-specific DNA binding	Blast	molecular function
transcription regulatory region DNA binding	Blast	molecular function
positive regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
metal ion binding	Orthology	molecular function
organelle	Blast	cellular component
plasma membrane region	Blast	cellular component
macromolecular complex	Blast	cellular component
cell projection part	Blast	cellular component
microtubule	Blast	cellular component
cytoplasmic part	Blast	cellular component
organelle part	Blast	cellular component

GO (Orthology)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function
nucleic acid binding	Hs	molecular function
DNA binding	Hs	molecular function
nucleus	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
positive regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
metal ion binding	Hs	molecular function

GO (Blast)

30 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	299	1.43e-87
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	233	1.50e-62
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	299	1.43e-87
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	233	1.50e-62
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	299	1.43e-87
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	299	1.43e-87
nucleic acid binding	Hs	molecular function	311	7.16e-91
DNA binding	Hs	molecular function	311	7.16e-91
chromatin binding	Hs	molecular function	233	1.50e-62
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	233	1.50e-62
protein binding	Hs	molecular function	233	1.50e-62
nucleus	Hs	cellular component	311	7.16e-91
nucleoplasm	Hs	cellular component	233	1.50e-62
nucleolus	Hs	cellular component	233	1.50e-62
cytoplasm	Hs	cellular component	233	1.50e-62
cytosol	Hs	cellular component	233	1.50e-62
cilium	Hs	cellular component	233	1.50e-62
axoneme	Hs	cellular component	233	1.50e-62
transcription factor binding	Hs	molecular function	233	1.50e-62
zinc ion binding	Hs	molecular function	233	1.50e-62
membrane	Hs	cellular component	233	1.50e-62
nuclear speck	Hs	cellular component	233	1.50e-62
motile cilium	Hs	cellular component	233	1.50e-62
cell projection	Hs	cellular component	233	1.50e-62
sequence-specific DNA binding	Hs	molecular function	233	1.50e-62
transcription regulatory region DNA binding	Hs	molecular function	233	1.50e-62
metal ion binding	Hs	molecular function	311	7.16e-91
ciliary tip	Hs	cellular component	233	1.50e-62
ciliary base	Hs	cellular component	233	1.50e-62
promoter-specific chromatin binding	Hs	molecular function	233	1.50e-62

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
nucleic acid binding	SMART	molecular function	7.6E-4

Gene Card

Best human hits

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Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences