Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000009639
NCBI Reference Sequence	XM_002120138.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg030e06

Plate: R1CiGC20o24

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
ALKBH8	PANTHER	Alkylated DNA repair protein alkB homologue 8
AlkB-like	Pfam	Alpha-ketoglutarate-dependent dioxygenase AlkB-like
Nucleotide-bd_a/b_plait_sf	Gene3D	Nucleotide-binding alpha-beta plait domain superfamily
Oxoglu/Fe-dep_dioxygenase	ProSiteProfiles	Oxoglutarate/iron-dependent dioxygenase
SAM-dependent_MTases	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferase
AlkB-like_sf	Gene3D	Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
RBD_domain_sf	SUPERFAMILY	RNA-binding domain superfamily
Methyltransf_11	Pfam	Methyltransferase type 11

GOSlim

18 results

GO Term	Annotation Origin	Type
nucleic acid binding	Orthology	molecular function
RNA binding	Orthology	molecular function
catalytic activity	Orthology	molecular function
iron ion binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
focal adhesion	Blast	cellular component
cellular response to DNA damage stimulus	Orthology	biological process
metabolic process	Orthology	biological process
zinc ion binding	Orthology	molecular function
nuclear body	Orthology	cellular component
transferase activity	Orthology	molecular function
metal ion binding	Orthology	molecular function
oxidation-reduction process	Orthology	biological process
RNA processing	Orthology	biological process

GO (Orthology)

25 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
tRNA binding	Hs	molecular function
tRNA wobble uridine modification	Hs	biological process
nucleic acid binding	Hs	molecular function
RNA binding	Hs	molecular function
catalytic activity	Hs	molecular function
iron ion binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
cellular response to DNA damage stimulus	Hs	biological process
metabolic process	Hs	biological process
methyltransferase activity	Hs	molecular function
ferrous iron binding	Hs	molecular function
zinc ion binding	Hs	molecular function
tRNA (uracil) methyltransferase activity	Hs	molecular function
oxidoreductase activity	Hs	molecular function
nuclear body	Hs	cellular component
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	Hs	molecular function
transferase activity	Hs	molecular function
tRNA methylation	Hs	biological process
methylation	Hs	biological process
metal ion binding	Hs	molecular function
oxidation-reduction process	Hs	biological process

GO (Blast)

22 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
tRNA binding	Hs	molecular function	444	7.18e-149
nucleic acid binding	Hs	molecular function	444	7.18e-149
RNA binding	Hs	molecular function	444	7.18e-149
catalytic activity	Hs	molecular function	444	7.18e-149
iron ion binding	Hs	molecular function	444	7.18e-149
protein binding	Hs	molecular function	444	7.18e-149
nucleus	Hs	cellular component	444	7.18e-149
nucleoplasm	Hs	cellular component	444	7.18e-149
cytoplasm	Hs	cellular component	444	7.18e-149
cytosol	Hs	cellular component	444	7.18e-149
focal adhesion	Hs	cellular component	62.0	1.67e-10
methyltransferase activity	Hs	molecular function	444	7.18e-149
tRNA methyltransferase activity	Hs	molecular function	146	3.70e-38
ferrous iron binding	Hs	molecular function	444	7.18e-149
zinc ion binding	Hs	molecular function	444	7.18e-149
tRNA (uracil) methyltransferase activity	Hs	molecular function	444	7.18e-149
oxidoreductase activity	Hs	molecular function	444	7.18e-149
nuclear body	Hs	cellular component	444	7.18e-149
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	Hs	molecular function	444	7.18e-149
transferase activity	Hs	molecular function	444	7.18e-149
metal ion binding	Hs	molecular function	444	7.18e-149
dioxygenase activity	Hs	molecular function	62.0	1.67e-10

GO (InterProScan)

8 results

GO Term	Analysis	Type	e-value
tRNA wobble uridine modification	PANTHER	biological process	1.5E-101
nucleic acid binding	SUPERFAMILY	molecular function	2.47E-6
metabolic process	Pfam	biological process	1.9E-13
methyltransferase activity	Pfam	molecular function	1.9E-13
tRNA (uracil) methyltransferase activity	PANTHER	molecular function	1.5E-101
oxidoreductase activity	ProSiteProfiles	molecular function	11.181
tRNA methylation	PANTHER	biological process	1.5E-101
oxidation-reduction process	ProSiteProfiles	biological process	11.181

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