Gene Card
Best human hits
EDC4
Unique Gene ID
Cirobu.g00005899
Gene Model ID
KH2012:KH.C3.7
Location
KhC3:1534471..1562317
Transcript Models and Sequences
KH2012:KH.C3.7.v1.C.SL2-1
KH2012:KH.C3.7.v1.C.SL3-1
KH2012:KH.C3.7.v1.C.SL4-1
KH2012:KH.C3.7.v2.R.ND1-1
Gateway full ORF
2 results
cien58180
Plate: VES79_N09
cien193944
Plate: VES100_E10
Gene collection 1 (N. Satoh)
1 result
cicl012c03
Plate: R1CiGC09d08
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
4 results
| IPR Term | Analysis | Definition |
|---|---|---|
| WD40_repeat_dom_sf | SUPERFAMILY | WD40-repeat-containing domain superfamily |
| EDC4_WD40 | Pfam | Enhancer of mRNA-decapping protein 4, WD40 repeat region |
| WD40_repeat | SMART | WD40 repeat |
| WD40_repeat | ProSiteProfiles | WD40 repeat |
GOSlim
10 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| protein binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| nucleoplasm | Orthology | cellular component |
| cytoplasm | Orthology | cellular component |
| cytosol | Orthology | cellular component |
| membrane | Orthology | cellular component |
| cytoplasmic part | Orthology | cellular component |
| intracellular non-membrane-bounded organelle | Orthology | cellular component |
| macromolecular complex | Orthology | cellular component |
| nuclear-transcribed mRNA catabolic process | Orthology | biological process |
GO (Orthology)
10 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| P-body | Hs | cellular component |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| cytosol | Hs | cellular component |
| membrane | Hs | cellular component |
| deadenylation-independent decapping of nuclear-transcribed mRNA | Hs | biological process |
| cytoplasmic ribonucleoprotein granule | Hs | cellular component |
| exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay | Hs | biological process |
GO (Blast)
8 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| P-body | Hs | cellular component | 325 | 1.65e-91 |
| protein binding | Hs | molecular function | 325 | 1.65e-91 |
| nucleus | Hs | cellular component | 325 | 1.65e-91 |
| nucleoplasm | Hs | cellular component | 325 | 1.65e-91 |
| cytoplasm | Hs | cellular component | 325 | 1.65e-91 |
| cytosol | Hs | cellular component | 325 | 1.65e-91 |
| membrane | Hs | cellular component | 325 | 1.65e-91 |
| cytoplasmic ribonucleoprotein granule | Hs | cellular component | 325 | 1.65e-91 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| protein binding | SUPERFAMILY | molecular function | 3.05E-19 |
