Gene Card
Best human hits
TRIM2; TRIM3; TRIM71
Unique Gene ID
Cirobu.g00005573
Gene Model ID
KH2012:KH.C3.396
Location
KhC3:5479365..5488358
Transcript Models and Sequences
External database links
1 result
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000012507 |
Gateway full ORF
2 results
cien130788
Plate: VES90_B19
cien206101
Plate: VES102_I07
Gene collection 1 (N. Satoh)
2 results
cicl008l05
Plate: R1CiGC09g06
cieg015g12
Plate: R1CiGC17h18
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
12 results
| IPR Term | Analysis | Definition |
|---|---|---|
| 6-blade_b-propeller_TolB-like | Gene3D | Six-bladed beta-propeller, TolB-like |
| NHL_repeat_subgr | ProSiteProfiles | NHL repeat, subgroup |
| Filamin/ABP280_repeat-like | ProSiteProfiles | Filamin/ABP280 repeat-like |
| Znf_B-box | SMART | B-box-type zinc finger |
| Znf_B-box | Pfam | B-box-type zinc finger |
| Ig_E-set | SUPERFAMILY | Immunoglobulin E-set |
| Znf_B-box | ProSiteProfiles | B-box-type zinc finger |
| Znf_B-box | CDD | B-box-type zinc finger |
| Filamin/ABP280_rpt | SMART | Filamin/ABP280 repeat |
| NHL_repeat | Pfam | NHL repeat |
| Ig-like_fold | Gene3D | Immunoglobulin-like fold |
| Filamin/ABP280_repeat-like | Pfam | Filamin/ABP280 repeat-like |
GOSlim
17 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| RNA binding | Blast | molecular function |
| ubiquitin-protein transferase activity | Blast | molecular function |
| protein binding | Blast | molecular function |
| intracellular | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| endosome | Blast | cellular component |
| early endosome | Blast | cellular component |
| Golgi apparatus | Blast | cellular component |
| protein C-terminus binding | Blast | molecular function |
| zinc ion binding | Blast | molecular function |
| transferase activity | Blast | molecular function |
| cell projection | Blast | cellular component |
| metal ion binding | Blast | molecular function |
| cytoplasmic part | Blast | cellular component |
| intracellular non-membrane-bounded organelle | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| negative regulation of gene expression | Blast | biological process |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
18 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| P-body | Hs | cellular component | 656 | 0.0 |
| RNA binding | Hs | molecular function | 656 | 0.0 |
| ubiquitin-protein transferase activity | Hs | molecular function | 656 | 0.0 |
| protein binding | Hs | molecular function | 656 | 0.0 |
| intracellular | Hs | cellular component | 656 | 0.0 |
| cytoplasm | Hs | cellular component | 656 | 0.0 |
| endosome | Hs | cellular component | 271 | 7.50e-80 |
| early endosome | Hs | cellular component | 271 | 7.50e-80 |
| Golgi apparatus | Hs | cellular component | 271 | 7.50e-80 |
| protein C-terminus binding | Hs | molecular function | 271 | 7.50e-80 |
| zinc ion binding | Hs | molecular function | 656 | 0.0 |
| transferase activity | Hs | molecular function | 656 | 0.0 |
| translation repressor activity | Hs | molecular function | 656 | 0.0 |
| dendrite | Hs | cellular component | 271 | 7.50e-80 |
| miRNA binding | Hs | molecular function | 656 | 0.0 |
| cell projection | Hs | cellular component | 271 | 7.50e-80 |
| metal ion binding | Hs | molecular function | 656 | 0.0 |
| ubiquitin protein ligase activity | Hs | molecular function | 656 | 0.0 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| protein binding | Pfam | molecular function | 6.1E-10 |
| intracellular | SMART | cellular component | 5.6E-9 |
| zinc ion binding | SMART | molecular function | 5.6E-9 |
