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GENE CARD

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  1. Gene 'KH2012:KH.C3.322'

Gene Card

Best human hits

RDH11; RDH12; RDH14

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00005494

Gene Model ID

KH2012:KH.C3.322

Location

KhC3:1758080..1760765

Transcript Models and Sequences

  KH2012:KH.C3.322.v1.C.ND1-1

External Database Gene Card

External database links

No result

Collections
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Genomicus Synteny Browser

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Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
SDR_fam Pfam Short-chain dehydrogenase/reductase SDR
SDR_fam PRINTS Short-chain dehydrogenase/reductase SDR
NAD(P)-bd_dom_sf SUPERFAMILY NAD(P)-binding domain superfamily

GOSlim

25 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
intracellular Orthology cellular component
nucleus Blast cellular component
mitochondrion Orthology cellular component
lysosomal membrane Blast cellular component
endoplasmic reticulum Orthology cellular component
endoplasmic reticulum membrane Orthology cellular component
visual perception Orthology biological process
membrane Orthology cellular component
integral component of membrane Orthology cellular component
response to stimulus Orthology biological process
oxidation-reduction process Orthology biological process
mitochondrial inner membrane Orthology cellular component
intracellular protein transport Orthology biological process
cellular metabolic process Orthology biological process
organic substance metabolic process Orthology biological process
neuron part Orthology cellular component
catalytic activity Orthology molecular function
G-protein coupled receptor signaling pathway Orthology biological process
regulation of signal transduction Orthology biological process
plasma membrane region Orthology cellular component
anatomical structure formation involved in morphogenesis Orthology biological process
animal organ development Orthology biological process
neuron development Orthology biological process
anatomical structure morphogenesis Orthology biological process

GO (Orthology)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
retinoid metabolic process Hs biological process
photoreceptor inner segment Hs cellular component
retinol dehydrogenase activity Hs molecular function
protein binding Hs molecular function
intracellular Hs cellular component
mitochondrion Hs cellular component
endoplasmic reticulum Hs cellular component
endoplasmic reticulum membrane Hs cellular component
visual perception Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
adaptation of rhodopsin mediated signaling Hs biological process
oxidoreductase activity Hs molecular function
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Hs molecular function
retinol metabolic process Hs biological process
retinal metabolic process Hs biological process
photoreceptor cell maintenance Hs biological process
response to stimulus Hs biological process
NADP-retinol dehydrogenase activity Hs molecular function
oxidation-reduction process Hs biological process
photoreceptor inner segment membrane Hs cellular component
mitochondrial inner membrane Hs cellular component
intracellular protein transport Hs biological process
retina layer formation Hs biological process
vesicle-mediated transport Hs biological process
eye photoreceptor cell development Hs biological process

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
photoreceptor inner segment Hs cellular component 201 2.27e-63
retinol dehydrogenase activity Hs molecular function 208 2.29e-66
protein binding Hs molecular function 208 2.29e-66
intracellular Hs cellular component 208 2.29e-66
nucleus Hs cellular component 199 2.25e-62
mitochondrion Hs cellular component 199 2.25e-62
lysosomal membrane Hs cellular component 199 2.25e-62
endoplasmic reticulum Hs cellular component 201 2.27e-63
endoplasmic reticulum membrane Hs cellular component 201 2.27e-63
alcohol dehydrogenase (NADP+) activity Hs molecular function 199 2.25e-62
membrane Hs cellular component 201 2.27e-63
integral component of membrane Hs cellular component 201 2.27e-63
oxidoreductase activity Hs molecular function 208 2.29e-66
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Hs molecular function 201 2.27e-63
NADP-retinol dehydrogenase activity Hs molecular function 208 2.29e-66
photoreceptor inner segment membrane Hs cellular component 208 2.29e-66

GO (InterProScan)

No result

GO Term Analysis Type e-value

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