Aniseed - Gene card

Gene 'KH2012:KH.C3.303'

Gene Card

Best human hits

HMCN1; IGSF9; IGSF9B

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00005474

Gene Model ID

KH2012:KH.C3.303

Location

KhC3:1302429..1316181

Transcript Models and Sequences

KH2012:KH.C3.303.v1.A.ND2-1
KH2012:KH.C3.303.v2.C.ND1-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000004965
ENSEMBL	ENSCING00000025063

Collections

Gateway full ORF

1 result

Gene collection 1 (N. Satoh)

2 results

citb037c13

Plate: R1CiGC32k08

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
Ig_V-set	Pfam	Immunoglobulin V-set domain
Ig-like_fold	Gene3D	Immunoglobulin-like fold
Ig-like_dom	ProSiteProfiles	Immunoglobulin-like domain
Ig_V-set	SMART	Immunoglobulin V-set domain
Ig_sub	SMART	Immunoglobulin subtype
Ig-like_dom_sf	SUPERFAMILY	Immunoglobulin-like domain superfamily
Ig_sub2	SMART	Immunoglobulin subtype 2

GOSlim

27 results

GO Term	Annotation Origin	Type
calcium ion binding	Blast	molecular function
protein binding	Orthology	molecular function
extracellular region	Blast	cellular component
cytoplasm	Blast	cellular component
plasma membrane	Orthology	cellular component
cell adhesion	Orthology	biological process
multicellular organism development	Orthology	biological process
nervous system development	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
kinase binding	Orthology	molecular function
cell junction	Orthology	cellular component
cell differentiation	Orthology	biological process
axon	Orthology	cellular component
neuronal cell body	Orthology	cellular component
synapse	Orthology	cellular component
postsynaptic membrane	Orthology	cellular component
extracellular exosome	Blast	cellular component
organelle	Orthology	cellular component
postsynapse	Orthology	cellular component
neuron part	Orthology	cellular component
neuron projection development	Orthology	biological process
cellular component organization	Orthology	biological process
extracellular region part	Blast	cellular component
cell periphery	Blast	cellular component
cytoplasmic part	Blast	cellular component
plasma membrane region	Blast	cellular component

GO (Orthology)

21 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein binding	Hs	molecular function
plasma membrane	Hs	cellular component
cell adhesion	Hs	biological process
homophilic cell adhesion via plasma membrane adhesion molecules	Hs	biological process
multicellular organism development	Hs	biological process
nervous system development	Hs	biological process
postsynaptic density	Hs	cellular component
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
dendrite development	Hs	biological process
kinase binding	Hs	molecular function
cell junction	Hs	cellular component
cell differentiation	Hs	biological process
axon	Hs	cellular component
dendrite	Hs	cellular component
neuronal cell body	Hs	cellular component
synapse	Hs	cellular component
postsynaptic membrane	Hs	cellular component
regulation of synapse organization	Hs	biological process
inhibitory synapse	Hs	cellular component
cell-cell adhesion mediator activity	Hs	molecular function

GO (Blast)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
calcium ion binding	Hs	molecular function	129	4.33e-31
protein binding	Hs	molecular function	318	9.06e-96
extracellular region	Hs	cellular component	129	4.33e-31
proteinaceous extracellular matrix	Hs	cellular component	129	4.33e-31
basement membrane	Hs	cellular component	129	4.33e-31
cytoplasm	Hs	cellular component	129	4.33e-31
plasma membrane	Hs	cellular component	318	9.06e-96
cell cortex	Hs	cellular component	129	4.33e-31
postsynaptic density	Hs	cellular component	318	9.06e-96
membrane	Hs	cellular component	318	9.06e-96
integral component of membrane	Hs	cellular component	318	9.06e-96
kinase binding	Hs	molecular function	318	9.06e-96
cell junction	Hs	cellular component	318	9.06e-96
axon	Hs	cellular component	296	6.84e-89
dendrite	Hs	cellular component	318	9.06e-96
extracellular matrix	Hs	cellular component	129	4.33e-31
cleavage furrow	Hs	cellular component	129	4.33e-31
neuronal cell body	Hs	cellular component	318	9.06e-96
synapse	Hs	cellular component	318	9.06e-96
postsynaptic membrane	Hs	cellular component	318	9.06e-96
inhibitory synapse	Hs	cellular component	318	9.06e-96
extracellular exosome	Hs	cellular component	129	4.33e-31
cell-cell adhesion mediator activity	Hs	molecular function	296	6.84e-89

GO (InterProScan)