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GENE CARD

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Gene Card

Best human hits

CTSK; CTSL; CTSV

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00005278

Gene Model ID

KH2012:KH.C3.124

Location

KhC3:6084731..6088546

Transcript Models and Sequences

  KH2012:KH.C3.124.v1.A.SL3-1
KH2012:KH.C3.124.v2.C.nonSL10-2
KH2012:KH.C3.124.v2.C.nonSL11-2
KH2012:KH.C3.124.v2.C.nonSL12-2
KH2012:KH.C3.124.v2.C.nonSL13-2
KH2012:KH.C3.124.v2.C.nonSL5-2
KH2012:KH.C3.124.v2.C.nonSL6-2
KH2012:KH.C3.124.v2.C.nonSL7-2
KH2012:KH.C3.124.v2.C.nonSL8-2
KH2012:KH.C3.124.v2.C.nonSL9-2
KH2012:KH.C3.124.v2.C.SL1-2
KH2012:KH.C3.124.v2.C.SL2-2
KH2012:KH.C3.124.v3.A.ND4-1
KH2012:KH.C3.124.v4.C.nonSL10-1
KH2012:KH.C3.124.v4.C.nonSL11-1
KH2012:KH.C3.124.v4.C.nonSL12-1
KH2012:KH.C3.124.v4.C.nonSL13-1
KH2012:KH.C3.124.v4.C.nonSL5-1
KH2012:KH.C3.124.v4.C.nonSL6-1
KH2012:KH.C3.124.v4.C.nonSL7-1
KH2012:KH.C3.124.v4.C.nonSL8-1
KH2012:KH.C3.124.v4.C.nonSL9-1
KH2012:KH.C3.124.v4.C.SL1-1
KH2012:KH.C3.124.v4.C.SL2-1
KH2012:KH.C3.124.v5.B.SL3-3

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000012592
NCBI Reference Sequence XM_002130246.4
Collections

Gateway full ORF

2 results

cien45764

Plate: VES77_B13

cien87658

Plate: VES84_I02

Gene collection 1 (N. Satoh)

1 result

ciad065i07

Plate: R1CiGC06j01

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
Peptidase_C1A_C SMART Peptidase C1A, papain C-terminal
Peptidase_C1A PANTHER Peptidase C1A
Pept_his_AS ProSitePatterns Cysteine peptidase, histidine active site
Peptidase_C1A_C Pfam Peptidase C1A, papain C-terminal
Pept_asp_AS ProSitePatterns Cysteine peptidase, asparagine active site
Prot_inhib_I29 Pfam Cathepsin propeptide inhibitor domain (I29)
Prot_inhib_I29 SMART Cathepsin propeptide inhibitor domain (I29)
Pept_cys_AS ProSitePatterns Cysteine peptidase, cysteine active site
Peptidase_C1A_C PRINTS Peptidase C1A, papain C-terminal

GOSlim

55 results

GO Term Annotation Origin Type
serine-type endopeptidase activity Orthology molecular function
protein binding Orthology molecular function
extracellular region Orthology cellular component
extracellular space Orthology cellular component
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
nucleolus Orthology cellular component
cytoplasm Orthology cellular component
lysosome Orthology cellular component
vacuole Orthology cellular component
proteolysis Orthology biological process
cell communication Orthology biological process
spermatogenesis Orthology biological process
peptidase activity Orthology molecular function
hydrolase activity Orthology molecular function
cytoplasmic vesicle Orthology cellular component
neuron projection Orthology cellular component
intracellular membrane-bounded organelle Orthology cellular component
apical part of cell Orthology cellular component
extracellular exosome Orthology cellular component
immune response Orthology biological process
signal transduction Orthology biological process
innate immune response Orthology biological process
peptidase activity, acting on L-amino acid peptides Orthology molecular function
endopeptidase activity Orthology molecular function
macromolecular complex binding Orthology molecular function
plasma membrane region Orthology cellular component
cell projection Orthology cellular component
cytoskeletal part Orthology cellular component
reproductive process Orthology biological process
animal organ development Orthology biological process
cellular response to stress Orthology biological process
response to organic substance Orthology biological process
plasma membrane part Orthology cellular component
cell surface Orthology cellular component
multicellular organism development Orthology biological process
gene expression Orthology biological process
immune system process Orthology biological process
endomembrane system Orthology cellular component
catabolic process Orthology biological process
endosome Orthology cellular component
vacuolar part Orthology cellular component
intracellular organelle lumen Orthology cellular component
binding Orthology molecular function
neuronal cell body Orthology cellular component
carbohydrate derivative binding Orthology molecular function
cell differentiation Orthology biological process
programmed cell death Orthology biological process
response to lipid Orthology biological process
organelle organization Orthology biological process
regulation of cellular metabolic process Orthology biological process
extracellular matrix organization Orthology biological process
intracellular organelle part Orthology cellular component
transmembrane transport Orthology biological process
cation transport Orthology biological process

GO (Orthology)

65 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
intramembranous ossification Hs biological process
fibronectin binding Hs molecular function
toll-like receptor signaling pathway Hs biological process
adaptive immune response Hs biological process
aminopeptidase activity Hs molecular function
cysteine-type endopeptidase activity Hs molecular function
serine-type endopeptidase activity Hs molecular function
protein binding Hs molecular function
collagen binding Hs molecular function
extracellular region Hs cellular component
extracellular space Hs cellular component
nucleus Hs cellular component
nucleoplasm Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
lysosome Hs cellular component
vacuole Hs cellular component
microvillus Hs cellular component
proteolysis Hs biological process
cell communication Hs biological process
spermatogenesis Hs biological process
peptidase activity Hs molecular function
cysteine-type peptidase activity Hs molecular function
male gonad development Hs biological process
cellular response to starvation Hs biological process
response to glucose Hs biological process
external side of plasma membrane Hs cellular component
multicellular organism aging Hs biological process
response to organic cyclic compound Hs biological process
protein processing Hs biological process
protein autoprocessing Hs biological process
hydrolase activity Hs molecular function
cysteine-type carboxypeptidase activity Hs molecular function
antigen processing and presentation Hs biological process
antigen processing and presentation of exogenous peptide antigen via MHC class II Hs biological process
secretory granule Hs cellular component
collagen catabolic process Hs biological process
kininogen binding Hs molecular function
cytoplasmic vesicle Hs cellular component
endolysosome lumen Hs cellular component
peptide binding Hs molecular function
histone binding Hs molecular function
neuron projection Hs cellular component
lysosomal lumen Hs cellular component
perikaryon Hs cellular component
intracellular membrane-bounded organelle Hs cellular component
proteoglycan binding Hs molecular function
apical part of cell Hs cellular component
bone resorption Hs biological process
regulation of keratinocyte differentiation Hs biological process
autophagic cell death Hs biological process
response to glucocorticoid Hs biological process
proteolysis involved in cellular protein catabolic process Hs biological process
extracellular exosome Hs cellular component
serpin family protein binding Hs molecular function
regulation of autophagy of mitochondrion Hs biological process
response to odorant Hs biological process
regulation of actin cytoskeleton reorganization Hs biological process
immune response Hs biological process
response to acidic pH Hs biological process
basement membrane disassembly Hs biological process
laminin binding Hs molecular function
tertiary granule lumen Hs cellular component
ficolin-1-rich granule lumen Hs cellular component
positive regulation of cation channel activity Hs biological process

GO (Blast)

34 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
fibronectin binding Hs molecular function 348 1.24e-119
aminopeptidase activity Hs molecular function 342 3.89e-117
cysteine-type endopeptidase activity Hs molecular function 348 1.24e-119
serine-type endopeptidase activity Hs molecular function 348 1.24e-119
protein binding Hs molecular function 348 1.24e-119
collagen binding Hs molecular function 348 1.24e-119
extracellular region Hs cellular component 348 1.24e-119
extracellular space Hs cellular component 348 1.24e-119
nucleus Hs cellular component 348 1.24e-119
nucleoplasm Hs cellular component 303 4.84e-102
nucleolus Hs cellular component 342 3.89e-117
cytoplasm Hs cellular component 342 3.89e-117
lysosome Hs cellular component 348 1.24e-119
vacuole Hs cellular component 342 3.89e-117
microvillus Hs cellular component 342 3.89e-117
peptidase activity Hs molecular function 348 1.24e-119
cysteine-type peptidase activity Hs molecular function 348 1.24e-119
external side of plasma membrane Hs cellular component 342 3.89e-117
hydrolase activity Hs molecular function 348 1.24e-119
cysteine-type carboxypeptidase activity Hs molecular function 342 3.89e-117
secretory granule Hs cellular component 342 3.89e-117
kininogen binding Hs molecular function 342 3.89e-117
cytoplasmic vesicle Hs cellular component 342 3.89e-117
endolysosome lumen Hs cellular component 348 1.24e-119
peptide binding Hs molecular function 342 3.89e-117
histone binding Hs molecular function 348 1.24e-119
neuron projection Hs cellular component 342 3.89e-117
lysosomal lumen Hs cellular component 348 1.24e-119
perikaryon Hs cellular component 342 3.89e-117
intracellular membrane-bounded organelle Hs cellular component 303 4.84e-102
proteoglycan binding Hs molecular function 348 1.24e-119
apical part of cell Hs cellular component 342 3.89e-117
extracellular exosome Hs cellular component 348 1.24e-119
serpin family protein binding Hs molecular function 348 1.24e-119

GO (InterProScan)

2 results

GO Term Analysis Type e-value
proteolysis Pfam biological process 1.0E-31
cysteine-type peptidase activity PANTHER molecular function 6.6E-127

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