Aniseed - Gene card

Gene Card

Best human hits

BLVRA; DHDH; GFOD1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00005247

Gene Model ID

KH2012:KH.C2.997

Location

KhC2:6396575..6400894

Transcript Models and Sequences

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000011372

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg015k24

Plate: R1CiGC17l12

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

2 results

IPR Term	Analysis	Definition
Oxidoreductase_N	Pfam	Oxidoreductase, N-terminal
NAD(P)-bd_dom_sf	SUPERFAMILY	NAD(P)-binding domain superfamily

GOSlim

11 results

GO Term	Annotation Origin	Type
protein binding	Blast	molecular function
extracellular region	Blast	cellular component
cytoplasm	Blast	cellular component
cytosol	Blast	cellular component
zinc ion binding	Blast	molecular function
metal ion binding	Blast	molecular function
oxidation-reduction process	Orthology	biological process
extracellular exosome	Blast	cellular component
organic substance metabolic process	Orthology	biological process
catalytic activity	Orthology	molecular function
cellular metabolic process	Orthology	biological process

GO (Orthology)

8 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
carbohydrate metabolic process	Hs	biological process
NAD(P)+ transhydrogenase activity	Hs	molecular function
electron carrier activity	Hs	molecular function
oxidoreductase activity	Hs	molecular function
electron transport chain	Hs	biological process
trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity	Hs	molecular function
D-xylose 1-dehydrogenase (NADP+) activity	Hs	molecular function
oxidation-reduction process	Hs	biological process

GO (Blast)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
biliverdin reductase activity	Hs	molecular function	40.4	8.12e-04
protein binding	Hs	molecular function	47.0	9.17e-06
extracellular region	Hs	cellular component	47.0	9.17e-06
cytoplasm	Hs	cellular component	40.4	8.12e-04
cytosol	Hs	cellular component	40.4	8.12e-04
zinc ion binding	Hs	molecular function	40.4	8.12e-04
NAD(P)+ transhydrogenase activity	Hs	molecular function	293	4.53e-98
electron carrier activity	Hs	molecular function	293	4.53e-98
oxidoreductase activity	Hs	molecular function	293	4.53e-98
metal ion binding	Hs	molecular function	40.4	8.12e-04
trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity	Hs	molecular function	293	4.53e-98
D-xylose 1-dehydrogenase (NADP+) activity	Hs	molecular function	293	4.53e-98
extracellular exosome	Hs	cellular component	40.4	8.12e-04

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
oxidoreductase activity	Pfam	molecular function	3.8E-25

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences

External database links

Gateway full ORF

cima868924

cien182580

Gene collection 1 (N. Satoh)

cieg015k24

Regulatory Regions

InterPro

GOSlim

GO (Orthology)

GO (Blast)

GO (InterProScan)