Aniseed - Gene card

Gene Card

Best human hits

RAD9A; RAD9B

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00005231

Gene Model ID

KH2012:KH.C2.982

Location

KhC2:2064345..2067239

Transcript Models and Sequences

KH2012:KH.C2.982.v1.A.nonSL2-1
KH2012:KH.C2.982.v1.A.nonSL3-1
KH2012:KH.C2.982.v1.A.nonSL4-1
KH2012:KH.C2.982.v1.R.ND1-1

External Database Gene Card

External database links

4 results

Database	Gene ID
ENSEMBL	ENSCING00000004836
NCBI Reference Sequence	XM_002130612.3
NCBI Reference Sequence	XM_004225652.3
NCBI Reference Sequence	XM_009859283.2

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

ciad032p14

Plate: R1CiGC03h02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
Rad9/Ddc1	Pfam	Rad9/Ddc1
Rad9/Ddc1	PANTHER	Rad9/Ddc1
Rad9	PIRSF	Rad9

GOSlim

18 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
DNA replication	Orthology	biological process
DNA repair	Orthology	biological process
cellular response to DNA damage stimulus	Orthology	biological process
hydrolase activity	Orthology	molecular function
enzyme binding	Orthology	molecular function
protein kinase binding	Orthology	molecular function
cell cycle	Orthology	biological process
DNA metabolic process	Orthology	biological process
intracellular non-membrane-bounded organelle	Orthology	cellular component
nuclear lumen	Orthology	cellular component
macromolecular complex	Orthology	cellular component
intracellular signal transduction	Orthology	biological process
positive regulation of signal transduction	Orthology	biological process
positive regulation of apoptotic process	Orthology	biological process

GO (Orthology)

24 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
cell cycle checkpoint	Hs	biological process
DNA replication checkpoint	Hs	biological process
DNA damage checkpoint	Hs	biological process
nuclease activity	Hs	molecular function
exonuclease activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
DNA replication	Hs	biological process
DNA repair	Hs	biological process
cellular response to DNA damage stimulus	Hs	biological process
3'-5' exonuclease activity	Hs	molecular function
exodeoxyribonuclease III activity	Hs	molecular function
hydrolase activity	Hs	molecular function
SH3 domain binding	Hs	molecular function
enzyme binding	Hs	molecular function
protein kinase binding	Hs	molecular function
checkpoint clamp complex	Hs	cellular component
intra-S DNA damage checkpoint	Hs	biological process
histone deacetylase binding	Hs	molecular function
cellular response to ionizing radiation	Hs	biological process
nucleic acid phosphodiester bond hydrolysis	Hs	biological process
positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage	Hs	biological process

GO (Blast)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nuclease activity	Hs	molecular function	247	2.08e-78
exonuclease activity	Hs	molecular function	247	2.08e-78
protein binding	Hs	molecular function	247	2.08e-78
nucleus	Hs	cellular component	247	2.08e-78
nucleoplasm	Hs	cellular component	247	2.08e-78
cytoplasm	Hs	cellular component	247	2.08e-78
3'-5' exonuclease activity	Hs	molecular function	247	2.08e-78
exodeoxyribonuclease III activity	Hs	molecular function	247	2.08e-78
hydrolase activity	Hs	molecular function	247	2.08e-78
SH3 domain binding	Hs	molecular function	247	2.08e-78
enzyme binding	Hs	molecular function	247	2.08e-78
protein kinase binding	Hs	molecular function	247	2.08e-78
checkpoint clamp complex	Hs	cellular component	247	2.08e-78
histone deacetylase binding	Hs	molecular function	247	2.08e-78

GO (InterProScan)