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GENE CARD

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  1. Gene 'KH2012:KH.C2.718'

Gene Card

Best human hits

TBC1D15; TBC1D17; TBC1D25

Unique Gene ID

Cirobu.g00004942

Gene Model ID

KH2012:KH.C2.718

Location

KhC2:27869..35990

Transcript Models and Sequences

  KH2012:KH.C2.718.v1.A.ND1-1

External Database Gene Card

External database links

2 results

Collections

Gateway full ORF

2 results

cien75468

Plate: VES82_P05

cien95230

Plate: VES85_O06

Gene collection 1 (N. Satoh)

2 results

cicl007l13

Plate: R1CiGC09m15

cieg057f16

Plate: R1CiGC24p17

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Rab-GTPase-TBC_dom Pfam Rab-GTPase-TBC domain
Rab-GTPase-TBC_dom ProSiteProfiles Rab-GTPase-TBC domain
Rab-GTPase_TBC_sf SUPERFAMILY Rab-GTPase-TBC domain superfamily
DUF3548 Pfam Domain of unknown function DUF3548
Rab-GTPase-TBC_dom SMART Rab-GTPase-TBC domain

GOSlim

19 results

GO Term Annotation Origin Type
GTPase activator activity Orthology molecular function
protein binding Orthology molecular function
extracellular region Orthology cellular component
intracellular Orthology cellular component
cytoplasm Orthology cellular component
mitochondrion Orthology cellular component
cytosol Orthology cellular component
intracellular protein transport Orthology biological process
endomembrane system Orthology cellular component
protein transport Orthology biological process
cytoplasmic vesicle Orthology cellular component
regulation of GTPase activity Orthology biological process
extracellular exosome Orthology cellular component
vacuole Orthology cellular component
enzyme binding Orthology molecular function
membrane organization Orthology biological process
organelle organization Orthology biological process
endosome Orthology cellular component
positive regulation of GTPase activity Orthology biological process

GO (Orthology)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
GTPase activator activity Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
intracellular Hs cellular component
cytoplasm Hs cellular component
mitochondrion Hs cellular component
autophagosome Hs cellular component
cytosol Hs cellular component
intracellular protein transport Hs biological process
autophagy Hs biological process
endomembrane system Hs cellular component
protein transport Hs biological process
Rab GTPase binding Hs molecular function
regulation of vesicle fusion Hs biological process
cytoplasmic vesicle Hs cellular component
retrograde transport, endosome to Golgi Hs biological process
regulation of GTPase activity Hs biological process
recycling endosome Hs cellular component
extracellular exosome Hs cellular component
activation of GTPase activity Hs biological process

GO (Blast)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
GTPase activator activity Hs molecular function 421 2.03e-139
protein binding Hs molecular function 421 2.03e-139
extracellular region Hs cellular component 421 2.03e-139
intracellular Hs cellular component 421 2.03e-139
cytoplasm Hs cellular component 421 2.03e-139
mitochondrion Hs cellular component 421 2.03e-139
autophagosome Hs cellular component 407 1.46e-134
cytosol Hs cellular component 407 1.46e-134
endomembrane system Hs cellular component 421 2.03e-139
Rab GTPase binding Hs molecular function 421 2.03e-139
cytoplasmic vesicle Hs cellular component 407 1.46e-134
recycling endosome Hs cellular component 407 1.46e-134
extracellular exosome Hs cellular component 421 2.03e-139

GO (InterProScan)

No result

GO Term Analysis Type e-value